Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00460 ATGAGTTCGAGTCCAACAACGTACGAAGATTCTGTTACCTCAAACGCCCCCAAAGAAATCGAGTGGCATATGCTCGACAAGTCAAAATTCTTCTTCCTAGGAGCAGCCCTGTTCTCCGGTCTCTCCGCAGCCCTCTACCCCGCCGTCGTCTTAAAGACACGTCAGCAAGTCTCCTCCGCAAAAATCTCGTGCCGCAACATGTCACGCGCCATCATGCGCTACGAGGGCTTCCGAGGTTTCTACAGAGGTTTCGGCACTTCCTTAATGGGCACAATCCCCGCACGTGCGCTCTACATGTCGGCACTCGAAGTCACCAAATCCAACGTCGGAACCGCCACCGTCCGCTTGGGTTTCTCCGACACCGCCGCCGCCGCCATCGCCAACGCCGCCGGCGGGGTCGCCTCCGCCATGGCTGCCCAATTGGTGTGGACCCCAGTCGATGTGGTGAGTCAGAGACTGATGGTCCAAGGAAGCAACAAAAATACTATAAACAATTTGAATGTAATCCACGGTCTAAAAAATTCAGGGTGTTACAAAAACGGCTTTGACGCGTTTAGGAAAATTCTGTGTGTTGATGGGCCAAGAGGGTTCTATAGAGGATTTGGGGTCTCAATTGTGACCTATGCTCCCTCTAATGCGGTTTGGTGGGCTTCGTATTCTATGGTGAATAGGCTTATTTGGGGCGCGTTTGGCACTGGTTCTACTTTTGGACGTGATTCTAATAATAAGGTCATGATGGTGGGTGTTCAAGGGTTGAGCGCGGTTATGGCAAGTGGGGTTTCTGCTATTGTGACTATGCCACTTGATACCATTAAAACGAGGTTGCAAGTCTTGGATGCTGAGGAAAACGGTCTAAGGAAACCTTTGACTCTTGTACACGCTGTTAGGAATTTGATGAAAGAAGGTGGGGTTTTGGCTTGTTACAGAGGCTTGGGACCAAGATGGGCTTCCATGTCTATGTCTGCTGCAACCATGATTACTACCTATGAATTCTTGAAACGCGTGTCTACTAAGAACATCGACAGATTAACTGTCTAG 1038 0.499 MSSSPTTYEDSVTSNAPKEIEWHMLDKSKFFFLGAALFSGLSAALYPAVVLKTRQQVSSAKISCRNMSRAIMRYEGFRGFYRGFGTSLMGTIPARALYMSALEVTKSNVGTATVRLGFSDTAAAAIANAAGGVASAMAAQLVWTPVDVVSQRLMVQGSNKNTINNLNVIHGLKNSGCYKNGFDAFRKILCVDGPRGFYRGFGVSIVTYAPSNAVWWASYSMVNRLIWGAFGTGSTFGRDSNNKVMMVGVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDAEENGLRKPLTLVHAVRNLMKEGGVLACYRGLGPRWASMSMSAATMITTYEFLKRVSTKNIDRLTV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00460 345 SUPERFAMILY Mitochondrial carrier 24 332 IPR023395 -
Pste8g00460 345 Gene3D Mitochondrial carrier domain 171 343 IPR023395 -
Pste8g00460 345 Gene3D Mitochondrial carrier domain 6 170 IPR023395 -
Pste8g00460 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 245 335 IPR018108 -
Pste8g00460 345 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 16 339 - -
Pste8g00460 345 Pfam Mitochondrial carrier protein 250 339 IPR018108 -
Pste8g00460 345 Pfam Mitochondrial carrier protein 42 108 IPR018108 -
Pste8g00460 345 Pfam Mitochondrial carrier protein 126 227 IPR018108 -
Pste8g00460 345 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Pste8g00460 345 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Pste8g00460 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Pste8g00460 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 225 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00460 Pste-Chr8 2436121 2437158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00460 19 339 Chloroplast and Mitochondria Gene Families AT5G26200 66.978 6.60e-158 444