Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00455 ATGGAGAGATTGCAGATGGAGAAAGAAGCTCCTCCTCAGGCCCCTTGGAGGCCCGCTGTTCCTTCTCCAAGTCCAAAACATGGTCAGAGGCATGACACAATCACTGGGAAGCCCTTTGAGGATGTTAGGCAGCACTACACACTTGGCAAAGAATTGGGGAGAGGCCAATTTGGGGTGACTTATCTCTGCACTGAAAATTCAACTGGCTTGCAGTATGCCTGCAAGTCCATTTCAAAGAGGAAGCTTGTGAGCAGAGGTGACAAGGAAGACATCAAGAGGGAGATTCAAATTATGCAGCATTTGAGTGGACAATCCAACGTTGTTGAGTTCAAAGGTGCTTATGAGGATAAGGAATCAGTTCATGTGGTTATGGAGCTGTGTTCAGGAGGTGAACTTTTTGATAAGATTACTGCCCAGGGTCACTACAGTGAAAGGGCCGCTGCTTCAATTTGTAGACAGATTGTTAAGGTTGTTAACACCTGCCATTTTATGGGAGTGATGCATAGGGATATCAAGCCAGAGAATTTCTTGTTATCCAGTAAGGATGACTTGGGACTCCTCAAGGCCACAGATTTTGGCTTGTCAGTCTTCATTGAAGAAGGAAAGGCTTATCGAGATATAGTTGGCAGTGCTTACTATATTGCTCCAGAAGTTCTACGTCGTAGCTATGGGAAAGAAGCAGATATATGGAGTGCAGGAGTTGTATTGTATATCTTACTTAGTGGTGTCCCTCCATTTTATGCAGCCACCGTAAAGGGAACATTTGAAGCCATATTGCAAGGTCATATTGATTTTGAAAGTAGTCCATGGCCAAGCATATCAATCGGTGCTAAGGACCTTGTTCGCAAGATGCTTACAAAGGATCGAAACCAACGCATTACTTCTGCTCACGTTCTTGAACACCCGTGGCTTAAAGAAGGTGGAGATGCTTCTGATAAGCCAATAGACAGTGCTGTTGTCTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTAAAAAAACTAGCCCTCAAGGTCATTGCTGAAAATCTTTCTGAAGAAGAGATCCGAGGTTTGAAGACATTGTTCACAAATATGGACACTGACAGTAGTGGTACAATCACCTGTAAGGAGCTGAGGACAGGATTGCAAAGACTTGGCTCAAAGCTTACTGAAGCTGAAGTGCGGCAGCTTATGGATGCCGCTGATGTAGATGGAAATGGCACAATTGACTACATAGAATTCATCACTGCTACGATGAATAGACACAAGTTAGAAAGAGATGAGCTTCTTTACAAGGCCTTCCAATATTTTGATAAGGACGGCTGTGGGTATATTACAAGAGATGAACTGGAAACTGTCATGAAGGAGTATGGTAAGGGTGACGAGGCGACAATCAGGGAAATTATGTCTGAAGTTGACACAGATCATGATGGTAGAATCAACTATGAGGAATTTTGTACAATGATGAGGAGTGGAACACGACCACAAAGCAAGCTAGTCTAATGTCACTAGCTAGATTGAGTGCCTTGCAGCCAAGATGGGATACTTCCGAGAAAGGCTTCCAAAAGTTCATATACATCATAAGCATCTAAAGATTATAGTCTAGATTTGTTGAGTTGCATGATCCGGGTTACTTGCTGTCAACTTTTATATTTCTCTTTTTGGTTGTGACTTGTTGTCAACTCTTATTTCTCGTTTTGGTTTCCTTTTCACTTTTGAGTTCACATATAATTTATTATGAGCACTAAAAAAAATGGACTTTCCTAGGGAGT 1754 0.4225 MERLQMEKEAPPQAPWRPAVPSPSPKHGQRHDTITGKPFEDVRQHYTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVSRGDKEDIKREIQIMQHLSGQSNVVEFKGAYEDKESVHVVMELCSGGELFDKITAQGHYSERAAASICRQIVKVVNTCHFMGVMHRDIKPENFLLSSKDDLGLLKATDFGLSVFIEEGKAYRDIVGSAYYIAPEVLRRSYGKEADIWSAGVVLYILLSGVPPFYAATVKGTFEAILQGHIDFESSPWPSISIGAKDLVRKMLTKDRNQRITSAHVLEHPWLKEGGDASDKPIDSAVVSRMKQFRAMNKLKKLALKVIAENLSEEEIRGLKTLFTNMDTDSSGTITCKELRTGLQRLGSKLTEAEVRQLMDAADVDGNGTIDYIEFITATMNRHKLERDELLYKAFQYFDKDGCGYITRDELETVMKEYGKGDEATIREIMSEVDTDHDGRINYEEFCTMMRSGTRPQSKLV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00455 494 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Pste8g00455 494 SUPERFAMILY EF-hand 343 483 IPR011992 -
Pste8g00455 494 CDD STKc_CAMK 45 303 - -
Pste8g00455 494 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
Pste8g00455 494 ProSiteProfiles EF-hand calcium-binding domain profile. 454 489 IPR002048 GO:0005509
Pste8g00455 494 FunFam Calcium-dependent protein kinase 1 48 131 - -
Pste8g00455 494 ProSiteProfiles Protein kinase domain profile. 46 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00455 494 ProSiteProfiles EF-hand calcium-binding domain profile. 347 382 IPR002048 GO:0005509
Pste8g00455 494 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Pste8g00455 494 SMART serkin_6 46 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00455 494 SUPERFAMILY Protein kinase-like (PK-like) 32 326 IPR011009 -
Pste8g00455 494 Pfam Protein kinase domain 46 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00455 494 FunFam calcium-dependent protein kinase 1 132 311 - -
Pste8g00455 494 ProSitePatterns Protein kinases ATP-binding region signature. 52 75 IPR017441 GO:0005524
Pste8g00455 494 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 479 - -
Pste8g00455 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pste8g00455 494 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
Pste8g00455 494 CDD EFh_PI-PLC 352 485 - -
Pste8g00455 494 Gene3D Phosphorylase Kinase; domain 1 48 131 - -
Pste8g00455 494 FunFam Calcium-dependent protein kinase 1 312 487 - -
Pste8g00455 494 CDD EFh 426 484 IPR002048 GO:0005509
Pste8g00455 494 SMART efh_1 351 379 IPR002048 GO:0005509
Pste8g00455 494 SMART efh_1 423 451 IPR002048 GO:0005509
Pste8g00455 494 SMART efh_1 458 486 IPR002048 GO:0005509
Pste8g00455 494 SMART efh_1 387 415 IPR002048 GO:0005509
Pste8g00455 494 ProSiteProfiles EF-hand calcium-binding domain profile. 419 453 IPR002048 GO:0005509
Pste8g00455 494 Gene3D - 312 486 - -
Pste8g00455 494 Gene3D Transferase(Phosphotransferase) domain 1 132 311 - -
Pste8g00455 494 MobiDBLite consensus disorder prediction 1 40 - -
Pste8g00455 494 Pfam EF-hand domain pair 352 412 IPR002048 GO:0005509
Pste8g00455 494 Pfam EF-hand domain pair 422 484 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00455 Pste-Chr8 2409109 2414400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00455 24 492 EF-hand Containing Proteins AT3G20410 75.480 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste8g00455 Pkinase 3.7e-72 CL0016