Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00454 CTTAGTCGGTCACGCACACCCCTCTTACCCCACTACTATATATACCCCATCACTGCCTATTGTTCTCAATTCCCTCTTGCTTTGTTTACAGGTCTTCCTTTCTCAGAGGTGGTGGTCAGAAAGCAAGGTACATATATGGTTGAAGTAGGCATTTTTCAGACCCCTTTTGATCCATTTGCTGAGGCTAAAGAAAGAGATGCCCCCGGGGCCAAAGAATACGTTCATATCCGCATACAACAAAGGAATGGGAAGAAGAGCTTGACCACAGTGCAAGGGCTGAAGAAGGAATTCAGCTATGAGAAGATCCTCAAAGACCTCAAGAAAGAGTTCTGCTGCAATGGTAATGTTGTGCATGACAAGGAGCTTGGCAAGATTATCCAGCTCCAAGGTGACCAACGCAAAAACGTTTCTCAATTCCTCACTCATGCTGGCCTTGTTAGGAAGGATCAGATCAAAATTCATGGTTTCTGACCAACTACCACTGTCACCTTTCTTAATTATATTAATTAATTTAACCTATAGCATCGTGTTTATGAAATAATTAGTAAAGTAATGAGTTGGAGTATTTGGTCATTCTCTTTCTGTATGATTGAAAATCCAACGATGGTCAGAGTGTGGTTATACATATTAATCACTACTTCATCTTGTGCTTCCAAGGACCGTGTTTCTAGCTATTTTGAGTAATTTTGACCTGACTTTGCTGTCACTATCATTAGATTCCATGATTATTAACGTTCTCAGAAAGAACATACTGCTATTAGATGACTCCCT 771 0.4047 LSRSRTPLLPHYYIYPITAYCSQFPLALFTGLPFSEVVVRKQGTYMVEVGIFQTPFDPFAEAKERDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVHDKELGKIIQLQGDQRKNVSQFLTHAGLVRKDQIKIHGF 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00454 156 Gene3D - 37 156 - -
Pste8g00454 156 ProSiteProfiles Translation initiation factor SUI1 family profile. 74 144 IPR001950 GO:0003743|GO:0006413
Pste8g00454 156 NCBIfam translation initiation factor SUI1 54 156 IPR005874 GO:0003743
Pste8g00454 156 Pfam Translation initiation factor SUI1 71 144 IPR001950 GO:0003743|GO:0006413
Pste8g00454 156 SUPERFAMILY eIF1-like 54 156 IPR036877 GO:0003743|GO:0006413
Pste8g00454 156 CDD eIF1_SUI1 72 155 IPR005874 GO:0003743
Pste8g00454 156 FunFam Eukaryotic translation initiation factor SUI1 46 156 - -
Pste8g00454 156 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 53 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00454 Pste-Chr8 2407618 2408729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00454 46 156 Eukaryotic Initiation Factors Gene Family AT5G54940 79.464 4.30e-62 185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00454 8 2407618 2408729 Pste8g00454 8 2407618 2408729 ECH