Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00424 TTTTGATATACTAATCATGGCTCATAAAAGAGCATACTGTTGCCTTGTTATGCTCTTTGTGTTGTCCATTTGGTTTGTGCCATCACTGGGAGACTCCAATGCTCAAATTTTGATTAGGTTCAGAAACTCAATATCCAATAACAAAGCCTTAGACAACTGGGTGGGGAACGAGACTAACTTGTGTAATTGGACTGGTTTGTTATGCCACAAAGACCAAACATTTTATGGTTTGAGACTGGAAAACATGGGACTAAGTGGGAATATTGATGTAGACACTTTGTTGGAATTATCAACTTTGACAAGCTTTAGTGTCATTAACAACACATTTGAGGGTCCAATGCCTGAGTTCAAAAATCTTGTGAACTTAAGGGCATTGTTTCTCTCCAATAACAAGTTCTCTGGTGATATTCCAGATGATGCTTTTGAGGGCATGGGAAGACTGAAAAGAGTGTTCTTGGCAGAAAATGGGTTCACAGGTCAGATTCCTAAGTCACTTACTAACTTGCCTAGACTCTGGGATTTGGACCTACATGGGAATAGTTTTGGTGGCAACATACCAGAGTTTCAACAAAAGGATTTCAGAGTGTTCAACATGTCACATAACCAATTGGAGGGTCAAATACCACAAAGCTTAAGCAATAAGGATCCAAGTTCATTTGCTGGCAACAAAGGCTTATGTGGAAAGCCTATGAATCCTTGCCGTAATAGTGGTGGCAGTAATAGTGGTGGCAGTAACAGTGATGGCAGTAACAAGTCTAATAATAAATCAGTGATTCCCAGCCATGATTCACCACAAAGAAAGGGAAAGAAACACAGAATCATTATAATTATAATAATAGTGGTGGCAGTGGTTGTTTCTGCTTCTATAGTGGCACTTCTATCTATCCTTAACCTCAGGAGAAAAAGTTGCACCCTTAACATTAAGCAATATGCAGGAAAATTCAAGAGCAGTGCAGGCAACAAGGAGTCACAATCAATTGATCTGACAAGTGATTTCAAGAAGGGTGGTGATGATGGAGAATTGAACTTTGTTAGGGAAGACAAAGGGGGGTTTGGCTTGCAAGATCTTCTTAGAGCGTCAGCTATGGTTCTTGGTAGTGGCAGTTTTGGCTCCACCTACAAGGCTATGATTTTGAATGGACCAACCTTGGTTGTGAAGAGGTTTAGGCACATGAACAATGTTGGGAAACAAGAGTTCTTTGACCACATGAAGAGGCTTGGAAGTTTGACACACCCTAATCTTCTCCCTCTTGCTGCATTTTACTACAGAAAAGAAGAGAAGTTTTTGAATAGTTCTGTGTTAACTTGGCCAACCCGTTTGAAAATCATTAAAGGGGTGGCTAGAGGCTTAGCCTACCTTTATGAAAACTTCCCTGGACAAAACCTACCACATGGTCATCTAAAGTCCTCCAATGTGGTATTGGACAATGCATTTCAGCCACAATTGATGGAGTATGGCCTTGTGCCAGTGATGAGAAAGAGCCATGCTCACCAGTTCATGGCAGCCTTCAAGTCCCCAGAGGTGAGCCAATTTGGGAGGCCAAATGTGAAGAGTGATGAAAAATTCCCAGCAAATTATCTGAGGCATGGGAATAAGGGAGGGAATAGTAATAATAACAATAATAATAATAATGATGGTGACTTGGCAACATGGGTGGAATCAGTTGTGAGGGAAGAGTGGACTGGTGAGGTGTTTGATAAGGACATAATGGGGACTAGAAATGGGGAGGGTGAGATGCTGAAGCTGCTGAGGATTGGAATGTATTGTTGCCAATGGAGTGTGGAGAGTAGGTGGAATTGGAGGGAAGCAGTGGCCAAGATTGAGGAGTTGAAAGAGAAGGATAGTGAGGATGAGTACTCTTCTTATGCAAGTGAAGGGGATTTGTATTCAAGGACTATGACTGAAGATGAGTTCTCTTTCTCTAGA 1927 0.4146 MAHKRAYCCLVMLFVLSIWFVPSLGDSNAQILIRFRNSISNNKALDNWVGNETNLCNWTGLLCHKDQTFYGLRLENMGLSGNIDVDTLLELSTLTSFSVINNTFEGPMPEFKNLVNLRALFLSNNKFSGDIPDDAFEGMGRLKRVFLAENGFTGQIPKSLTNLPRLWDLDLHGNSFGGNIPEFQQKDFRVFNMSHNQLEGQIPQSLSNKDPSSFAGNKGLCGKPMNPCRNSGGSNSGGSNSDGSNKSNNKSVIPSHDSPQRKGKKHRIIIIIIIVVAVVVSASIVALLSILNLRRKSCTLNIKQYAGKFKSSAGNKESQSIDLTSDFKKGGDDGELNFVREDKGGFGLQDLLRASAMVLGSGSFGSTYKAMILNGPTLVVKRFRHMNNVGKQEFFDHMKRLGSLTHPNLLPLAAFYYRKEEKFLNSSVLTWPTRLKIIKGVARGLAYLYENFPGQNLPHGHLKSSNVVLDNAFQPQLMEYGLVPVMRKSHAHQFMAAFKSPEVSQFGRPNVKSDEKFPANYLRHGNKGGNSNNNNNNNNDGDLATWVESVVREEWTGEVFDKDIMGTRNGEGEMLKLLRIGMYCCQWSVESRWNWREAVAKIEELKEKDSEDEYSSYASEGDLYSRTMTEDEFSFSR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00424 637 Gene3D Transferase(Phosphotransferase) domain 1 528 626 - -
Pste8g00424 637 Gene3D Transferase(Phosphotransferase) domain 1 421 515 - -
Pste8g00424 637 Gene3D Ribonuclease Inhibitor 189 228 IPR032675 -
Pste8g00424 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 611 IPR046959 -
Pste8g00424 637 SUPERFAMILY Protein kinase-like (PK-like) 358 605 IPR011009 -
Pste8g00424 637 MobiDBLite consensus disorder prediction 200 260 - -
Pste8g00424 637 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Pste8g00424 637 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Pste8g00424 637 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Pste8g00424 637 Gene3D Phosphorylase Kinase; domain 1 333 420 - -
Pste8g00424 637 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Pste8g00424 637 MobiDBLite consensus disorder prediction 228 256 - -
Pste8g00424 637 MobiDBLite consensus disorder prediction 200 214 - -
Pste8g00424 637 Pfam Protein tyrosine and serine/threonine kinase 358 514 IPR001245 GO:0004672|GO:0006468
Pste8g00424 637 FunFam Nuclear pore complex protein NUP107 25 182 - -
Pste8g00424 637 SUPERFAMILY L domain-like 48 208 - -
Pste8g00424 637 ProSiteProfiles Protein kinase domain profile. 353 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00424 Pste-Chr8 2229902 2234567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00424 12 635 Receptor kinase-like Gene Family AT4G31250 40.594 4.29e-163 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g00424 PK_Tyr_Ser-Thr 3.7e-06 CL0016