Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00420 GCCGGTTTGAGAGGCATGCAAAGCATGTGTCACAGGGTCCTTCCAGTTTCTCGCATGCGGTACGCAGATAACAAGAAGCAAGGAGAAAACGGAAAAGCCCAGTGAATTTGGTAGTGAATGGCGAATTTGCCCCAATCGATCTCCTTAAGCGGCACGTCGTTTGGAGCTCCATCTCCCTCTGCCACCAAGGATCGCAGAATGGCATCTGTTGAACACCTGGTTCTCGAACTCAGCAACCCCGATCTCCGAGAAAATGCTCTTCATGAACTCTCCAAGAAGAGAGAGTTATTTCAGGATCTTGCTCCATTATTGTGGAATTCTTTTGGTACTATGGCAGCGCTTTTGCAGGAAATAGTTTCCATATACCCTGTTATTTCACCGCCAAACCTTACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCATCTCACCTTGATACAAGGATGCAATTCCTCAATGCTCACATACCTCTATATCTGTATCCCTTCCTTAACACAACTAGTAAGTCCAGACCATTTGAGTATTTGAGGCTTACCAGTCTTGGAGTCATTGGTGCCTTGGTGAAGGTTGATGATACAGAGGTTATAAGTTTCCTTCTTTCCACAGAGATTATTCCGCTTTGCCTGCGCAGTATGGAAATGGGCAGTGAATTGTCAAAAACTGTTGCAACCTTTATAGTTCAAAAAATTCTGTTAGACGAAATAGGTTTGAAATATATTTGCACTACAGCAGAGCGCTTTTATGCAGTGGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTGGAGCAACCTTCATGTCGTCTTTTGAAGCACATTATTCGATGTTATCTTCGTCTGTCAGATAATCAGAGTGCTTGCGAGGCATTAAGAACCTGCCTTCCAGACATGTTAAGAGACGCTACATTCAGTAGCTGCCTTCGTGAAGACCCAACAGCTAGGAGGTGGCTACAGCAGTTGCTTCATAATATTGGAGTCAATCGGGTTCCTGCACTACAAGGTGGAGGAGGATTCGATCATATGATGGTGTCATGAGAGAGAACAAAGATCTTGCCTCGTCGCTGGGCTTGCTACTTTCTTCGTGAAAATTGTCAACTTGCTACATACATAGATAGAGAATGGCATTTTCATTTGGGCATATATTGAGAATGAAGAACTGATAATTAAGGAAGAATTTGTGTCCACCGGTTTTATGTTGGGAGTGAAGTAAACATGTGACCTCTCAATTGAATATAAATAATAAGATCGTAATGAGCCATCTTTTTTCAAGTCTAGATAGAGAATGGCATTTTCATTTGGGCATATATTGAGAATGAAGAACTGATAATTAAGGAAGAATGTGTCCACCGGTTTTATGTTGGGAGTGAAGTAAACATGTGACCTCTCAATTGAATATAAATAATAAGATCGTAATGAGCCATCTTTTTTCAAGTCTAG 1458 0.4218 MANLPQSISLSGTSFGAPSPSATKDRRMASVEHLVLELSNPDLRENALHELSKKRELFQDLAPLLWNSFGTMAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHLDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEIGLKYICTTAERFYAVGRVLGNMVATLVEQPSCRLLKHIIRCYLRLSDNQSACEALRTCLPDMLRDATFSSCLREDPTARRWLQQLLHNIGVNRVPALQGGGGFDHMMVS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00420 312 FunFam Cell differentiation protein RCD1 24 295 - -
Pste8g00420 312 SUPERFAMILY ARM repeat 36 273 IPR016024 -
Pste8g00420 312 MobiDBLite consensus disorder prediction 1 20 - -
Pste8g00420 312 Pfam Cell differentiation family, Rcd1-like 34 292 - -
Pste8g00420 312 MobiDBLite consensus disorder prediction 1 23 - -
Pste8g00420 312 Gene3D - 23 293 IPR011989 -
Pste8g00420 312 PANTHER UNCHARACTERIZED 24 295 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00420 Pste-Chr8 2207348 2212004 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Pste8g00420 Rcd1 2e-128 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01322 7 11939484 11948526 Pste8g00420 8 2207348 2212004 PCT