Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00417 TTCCCCATAAACTCTTGCAGATAATGCAATGGCAAAACCACACAGAAAGTGACCCCTGGGAATCAAAAGTTAAAACCAATGGCACAGCATATCACAGTGTATACAGTGTTATTTACTATATGGCATAGCACTGGCATAACAGTTTGGGGAGAGAGAGAGTGAAAACAAGTGTAAAAAGAGAGAAAGTTAGGACGGGGAGAGAGAGTGTGCAGAGTTTGCAGGTTTGTAGCAGAAATGGTGGCAGATGGTTTTAACTTTATGTGTGAAATAATTTTCTTCTATCTCTCTTCTCTTTTGTGTTTTTTCTCTCTCACTTTTCTTTTTCTTCCTGCATCTTGTGTTAGAGACTAGGGAGTGATGTTTGTGGCAGAACGATGTGATTGCACAGCCAAAGCTGTGGACTTGTTCTGTTACTACATGGAAATCCAACCCTTCTTGTAATCACATAAGAAGCTAGAGGGTATGAAGAGTACACCGGAGAATACTACTCTCAAACTAAACCCACCTCACCCTTTTATCTCAACCCATAGTTGAGTGGTGTTCTCACTGTCACAAAGCATAGCATCTTTTTTGTTCTTGAACAAGAGCGTTTGGAAAGAGCTTGGTTCTTGAGTGTTTTCATGGTTAGGCTGGTGTGAAGTTGAAATCCTGCAGCTGCAGCTATGGCATTTCGACTTGGGGTCCTTATTCTTGCTTTGCTATTTTGTTTGAATGTCAATTCTGTGGAATCAGATGACGGAGCAACGTTGTTGGAGATAAAGAAGTCATTCAGGGATGTCGATAATGTTCTCTATGATTGGACAGACTCACCATCATCGGATTATTGTGCATGGAGAGGGATAACATGTGATAATGTCACCTTTAACATTGTTGCACTCAATCTTTCAGGGTTGAATCTTGATGGTGAAATTTCACCTGCAATAGGGAAACTTCAGAGTTTGGTCAATATTGACCTCAGAGAAAATAGGTTATCAGGGCAGATACCAGATGAGATTGGTGACTGTTCTTCTTTAAAGAGCTTGGACTTGTCATTTAATGAAATTAGAGGGGATATACCATTTTCTATTTCTAAGTTGAAACAGCTGGAGAATCTGGTTTTGAAGAACAACCAGTTGATTGGACCAATTCCTTCAACACTGTCTCAGATTCCTGATTTGAAGATTCTAGACCTAGCTCAAAATAATCTTAGTGGAGAAATACCAAGGCTTATATATTGGAACGAAGTTTTGCAATATCTGGGCTTGAGAGGTAACAATCTGGTTGGTTCACTATCACCAGACATGTGCCAGTTAACCGGGCTGTGGTATTTTGATGTGAGAAACAATAGTCTGACAGGGAGTATTCCAGAGAACATAGGCAACTGTACTTCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTAACTGGAGAGATACCATTCAATATTGGGTTCTTGCAAGTAGCAACTTTGTCATTGCAAGGCAATAAACTCTCCGGGCATATTCCATCAGTGATTGGTCTCATGCAAGCACTTGCTGTCCTAGACTTAAGCTGTAACATGTTAAGTGGACCAATCCCTCCTATCCTGGGAAATTTGACTTACACAGAAAAATTGTACTTGCATGGAAACAAGCTGACTGGTTTCATCCCCCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCACTTAAGTGGACATATCCCTCCCGAGCTTGGAAAACTTACTGATCTGTTTGATCTAAATGTTGCTAACAACAATCTCGAGGGCCTAATACCAAGTAATATTAGCTCATGTAAAAATCTCAACAGCCTCAATGTGCATGGGAACAAGTTGAATGGAACAATTCCCCCTTCTTTGCAGAGCTTGGAGAGCATGACCTCTTTGAATCTTTCTTCCAACAATCTTAAGGGTGCAATTCCAATTGAACTGTCGCGGATTGGTAATTTGGATACATTGAATTTGAGTAGAAACAATTTAATAGGAGTTATTCCAGCAGAATTTGGAAATCTTAGAAGTGTTATGGAAATTGATCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATGCTATCCTTGAGACTTGAATACAACAAGTTAACCGGGGATGTGGCATCACTTTCAAATTGCCTTAGTCTCTCTCTGCTTAATGTGTCTTATAACAAACTATTTGGTGTTATTCCCACAAGCAACAACTTTACCAGGTTTCCTCCTGACAGTTTCATTGGAAACCCTGGTCTTTGTGGTAATTGGCTGAATTTGCCGTGCCATGGGGCTCGCCCTGCTGAGCGAGTTACATTATCTAAGGCGGCTATTTTGGGAATTACTCTTGGTGCCCTTGTAATTCTTCTTATGGTATTGCTAGCAGCTTGCCGACCACATAGTCCTTCTCCTTTTCCTGATGGATCACTTGACAAACCAGTTAATTACTCCCCTCCAAAACTGGTCAGTCTTCATATGAATTTGACACTTCATGCGTATGAAGACATCATGACGATGACTGAAAACCTGAGTGAGAAATATATAATTGGATATGGTGCATCAAGTACAGTTTATAAATGTCTTCTTAAGAATTGCAAGCCAGTGGCTATCAAGAGGATCTATTCCCACTATCCCCAATGTATTAAAGAATTTGAAACTGAACTTGCAACTGTTGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCCCCATATGGCCACCTCCTGTTTTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCATGGACCTACAAAGAAGAAAAAGCTTGACTGGGATCTGCGTCTAAAAATAGCACTCGGGGCAGCACAAGGGCTTGCTTATCTACACCGTGATTGCAGTCCTCGAATCATCCACAGGGATGTGAAATCATCCAACATTCTATTAGATGCAGACTTTGAGCCCCATCTCACTGATTTTGGCATTGCTAAAAGCCTCTGCCCCTCAAAGTCCCATACTTCTACTTACATAATGGGCACAATTGGCTACATAGACCCTGAGTATGCTAGAACTTCACGACTCACTGAGAAATCTGATGTGTATAGTTATGGTATCGTTTTACTTGAGTTGCTAACAGGAAGGAAAGCTGTGGACAATGAGTCCAACCTCCACCATCTGATTTTGTCCAAGGCAGCAACCAATGCTGTGATGGAAACTGTTGATCCAGACATTACTGCCACATGCAAGGACCTAGGAGCAGTAAAAAAGGTTTATCAGCTTGCTCTATTGTGCACAAAGAGGCAGCCTACTGATAGACCGACAATGCACGAAGTGACACGTGTACTTGGAAGCCTTGTGCCATCAAGCATCCCGCCAAAACAACCGGCTGCACTACCACCTGCTTCAAATCCATCTGCCAAAGTGCCATGCTACATGGATGAGTATGCAAACCTCAAGACTCCACACTTGGTGAACTGCCCCTCAATGAGCACCTCAGATGCTCAACTCTTCCTCAAGTTTGGAGAAGTAATATCTCAGAACAGTGAGTGAGTGAGTATTTTGAAGATGCTCAACTCCAAGAATCATGTATATTAAAACGCAAAAAAGAGAAAAAAAAATGGATGAGGGGTACAAGTTAATGAAAAAATGTTTATAAAAGTTTTAGTACTAGTTTTAGTGTTCTTGATTTGAACAGGAAAGATATGTATCACAATTTGAAAGGTGAAGTAATCCAATTCTTGTACTTGTTTGGTAGCACACAAGGTTGCAGTAGTAAAGTTAAGGGTCTGGGACCAATCTGCAGGGTGGGGTAGCTAAGGTCTTAATGGTAGGAGGAAGCATTGCATAAGTTGTGAACATCAATAATGCACTGATTCTTAGCTGGCCAGGGATCAGTTATCTGTCTGAATGCTGGCAGTATTTAGCAGAGTGTATCCATTACCTCTTTTACTACCTGATGCCATATGCTCAGTAAAGTGCCATGACATTATGTCATGAAATTTTGGGTCATTGGCCTCACACACAGAAAGATGGTCCAAATTATGACTTTGGTTTCCGTGCCTTGTTGACTCAAATATGTTTATGTGTTAAGTGTCATTAATTTAATAATTCTCAGCAGCTGGAAAATGAA 4113 0.4089 MAFRLGVLILALLFCLNVNSVESDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCAWRGITCDNVTFNIVALNLSGLNLDGEISPAIGKLQSLVNIDLRENRLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLENLVLKNNQLIGPIPSTLSQIPDLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTSFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGLIPSNISSCKNLNSLNVHGNKLNGTIPPSLQSLESMTSLNLSSNNLKGAIPIELSRIGNLDTLNLSRNNLIGVIPAEFGNLRSVMEIDLSNNQLSGLIPEELSQLQNMLSLRLEYNKLTGDVASLSNCLSLSLLNVSYNKLFGVIPTSNNFTRFPPDSFIGNPGLCGNWLNLPCHGARPAERVTLSKAAILGITLGALVILLMVLLAACRPHSPSPFPDGSLDKPVNYSPPKLVSLHMNLTLHAYEDIMTMTENLSEKYIIGYGASSTVYKCLLKNCKPVAIKRIYSHYPQCIKEFETELATVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGPTKKKKLDWDLRLKIALGAAQGLAYLHRDCSPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKAATNAVMETVDPDITATCKDLGAVKKVYQLALLCTKRQPTDRPTMHEVTRVLGSLVPSSIPPKQPAALPPASNPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00417 956 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 186 - -
Pste8g00417 956 Gene3D Ribonuclease Inhibitor 258 550 IPR032675 -
Pste8g00417 956 FunFam Piriformospora indica-insensitive protein 2 322 419 - -
Pste8g00417 956 Gene3D Ribonuclease Inhibitor 187 257 IPR032675 -
Pste8g00417 956 SUPERFAMILY Protein kinase-like (PK-like) 600 889 IPR011009 -
Pste8g00417 956 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 594 698 - -
Pste8g00417 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Pste8g00417 956 CDD STKc_IRAK 629 892 - -
Pste8g00417 956 SMART LRR_typ_2 210 234 IPR003591 -
Pste8g00417 956 SMART LRR_typ_2 162 186 IPR003591 -
Pste8g00417 956 SMART LRR_typ_2 401 425 IPR003591 -
Pste8g00417 956 SMART LRR_typ_2 329 353 IPR003591 -
Pste8g00417 956 SMART LRR_typ_2 90 114 IPR003591 -
Pste8g00417 956 SMART LRR_typ_2 449 472 IPR003591 -
Pste8g00417 956 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Pste8g00417 956 Gene3D Transferase(Phosphotransferase) domain 1 699 897 - -
Pste8g00417 956 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 420 542 - -
Pste8g00417 956 SMART serkin_6 623 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00417 956 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 187 296 - -
Pste8g00417 956 Gene3D Ribonuclease Inhibitor 22 186 IPR032675 -
Pste8g00417 956 Pfam Protein kinase domain 626 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00417 956 Gene3D Phosphorylase Kinase; domain 1 595 698 - -
Pste8g00417 956 ProSiteProfiles Leucine-rich repeat profile. 116 139 IPR001611 GO:0005515
Pste8g00417 956 SUPERFAMILY L domain-like 24 296 - -
Pste8g00417 956 ProSiteProfiles Protein kinase domain profile. 623 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00417 956 SUPERFAMILY L domain-like 262 535 - -
Pste8g00417 956 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 161 890 - -
Pste8g00417 956 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 699 900 - -
Pste8g00417 956 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Pste8g00417 956 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Pste8g00417 956 Pfam Leucine rich repeat 359 414 IPR001611 GO:0005515
Pste8g00417 956 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00417 Pste-Chr8 2173995 2182821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00417 7 955 Receptor kinase-like Gene Family AT5G62230 61.134 0.0 1119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pste8g00417 Pkinase 6.2e-44 CL0016