Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00410 TGTAAGGGACATGGCAAAGATATTGCAGTTTTGGAAGATAAGTTGGATTCTGGAAAGGAAAGTTCAACAAAAGCCAGGATGGAAGGGAGGCAGGCGGGCCAAGAATTCTCTAACAAAGTTCCTAAATTGGATCAAGCATCGGAAACCATTTCAATGATCAAGAAAGCTCGTGTATCAGTTCGAGCAAGATCAGATTCTTCAATGATAGCAGATGGATGCCAGTGGAGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCTTGTCCAAGAGCCTATTATCGTTGCACAATGAGCAGTGGTTGTCCAGTACGAAAACAAGTACAAAGGTGCGCTGAAGATAGAAGTGTGCTGATGACAACATATGAAGGGCAGCATAACCATCCACTCCCTCCAACAGCGCAGGCAATGGCATCCACAACATCTGCAGCTGCGTCAATGCTTCTGTCTGGATCAATGCCAAGCTCTGATGGCCTAATCAATCAAAGCATATTAGAAACTCAAAACATGCCTACTCTCTCTGCCTCAGCCCCATTTCCAACCATCACACTTGATCTCACTCAAAATGCTCCCAACTCCTCAAACTCAAACTCACACACCCTCCTAACTCCTCTTTTGCCTCATAACTTCATTTCAGCTCCAAAAATATTTGGACAGGCACTCACACTGTGTGATCAAACCAAGCTTGCTGGCTTACATGACTCTCACTCTAACTCTCAGGACGCAACCTCATTGTTTGCTAACACACTAAATGCAGCTACTGCTGCTATCACAGCAGACCCCAATTTCACTGCAGCTCTTGTCGCAGCTATAACATCTGTCATGGGGAGTCCACGCTCAAGCACCAATGCCACCAATAATTCAAGTGGAGATGAGCACTGCAATAACAATTAA 891 0.4501 CKGHGKDIAVLEDKLDSGKESSTKARMEGRQAGQEFSNKVPKLDQASETISMIKKARVSVRARSDSSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSSGCPVRKQVQRCAEDRSVLMTTYEGQHNHPLPPTAQAMASTTSAAASMLLSGSMPSSDGLINQSILETQNMPTLSASAPFPTITLDLTQNAPNSSNSNSHTLLTPLLPHNFISAPKIFGQALTLCDQTKLAGLHDSHSNSQDATSLFANTLNAATAAITADPNFTAALVAAITSVMGSPRSSTNATNNSSGDEHCNNN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00410 296 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00410 296 SMART WRKY_cls 69 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00410 296 FunFam probable WRKY transcription factor 31 54 131 - -
Pste8g00410 296 ProSiteProfiles WRKY domain profile. 64 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00410 296 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 24 285 IPR044810 GO:0003700
Pste8g00410 296 MobiDBLite consensus disorder prediction 12 32 - -
Pste8g00410 296 MobiDBLite consensus disorder prediction 275 296 - -
Pste8g00410 296 MobiDBLite consensus disorder prediction 12 26 - -
Pste8g00410 296 Gene3D WRKY domain 54 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00410 296 SUPERFAMILY WRKY DNA-binding domain 62 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00410 Pste-Chr8 2132770 2133962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00410 29 274 WRKY Transcription Factor Family AT4G04450 55.814 2.11e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g00410 WRKY 8.2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01128 7 10424035 10426324 Pste8g00410 8 2132770 2133962 PCT
Pste7g01327 7 12029735 12033271 Pste8g00410 8 2132770 2133962 PCT