Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00406 CTTCAATATCGCTCTACTCTTCCTAGAGCGGGAACACAACATTCATTGCTGCGAACTTTTTGCTTTGCTTGTTTCGGCTCCTAGGGTTTCAAATTCGCTCTTCCTTTCGCAATTTGCAGTGACTGTCGCCATGAATCTGCGCCATGGCTCCAAGGTTTGGGTCGAGGACCGGGATTCGGCATGGGAGCCTGCTGAAGTTCTCGATTCTCACGGTAACCGTCTTTTGCTCGTCACTGATTCCGGCAAGAAGGTTTATGCTTCGCCGGAGAAGCTGTTTCCGAGGGATGCGGATGAAGAGGAGCATGGTGGATTCGAAGATATGACGAGGTTGGCGTACTTGAACGAGCCCGGAGTGTTGTTCAATATTCGGAGGAGATATGCGCTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACGAAGCTTCCTCATTTATATGATTCCCATATGATGGATCAATATAAGGGAGCTCCATTGGGTGAGCTTAGCCCACATGTTTTCGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGTCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACAACAAAGTTGATCATGCAGTATCTTACTTTTGTTGGTGGACGTGCTGCTGGCGATGATAGAACAGTTGAACAGCAAGTTCTTGAATCCAATCCGCTTTTAGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCAGGTGCTGCAATCAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAAAGAAATTATCACTGTTTTTATCAGCTGTGTGCATTTGAAAGGGATGCGGAGAAGTATAAGTTAGGACATCCAAGTCGCTTCCACTATCTAAATCAAAGTAAAATCTATGAATTAGATGGTGTAAGCAATGTCGAAGAATATCTGAAGACAAGGAGGGCAATGGATATTGTTGGTATCAGTCACATGGATCAGGAAGTCATATTTCGTGTCTTGGCTGGAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAACACGACTCATCAGTAGTAAAGGATGAAAAATCAAGATTTCATATGCAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACTTACTGCTTGCAACATTGTGTACTCGTTCAATACAAACTCGTGAAGGAAGCATTATCAAGGCACTTGATTGCACTGCTGCTGTTGCTGGCCGTGATACTTTGGCAAAAACTGTTTACGCTCGTTTGTTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTTGGGCAAGATATCAATTCCAAGATACAGATTGGAGTTTTGGATATTTACGGTTTTGAGTGCTTTAAGGATAATAGTTTTGAGCAATTCTGTATCAATTTTGCAAATGAGAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATGGTAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTTTAGATTTAATTGAGAAGAAACCCATTGGTATTATTGCTCTGTTGGATGAAGCTTGTATGTTTCCAAAATCGACACATGAAACATTCTCAACCAAGTTGTTTCAGTATTTCCGCTCTCACCCTAGGTTGGGCAAGGAAAAGTTTTCACAAACAGATTTTACCATTTCTCATTATGCTGGAAAGGTCACTTACCATACAGATACCTTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAACATTGTAATCTATTATCTTCTTCAAAATGCCCTTTTATTTCTGGCCTTTTTCGTTTGCTACCAGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCCAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTAAAGTCAACAGAGCCTCATTATATACGATGTGTGAAACCAAATTCTTTGAATCGACCACAAATATTTGAAAATGCAAGCGTCATACACCAGTTACGCTGCGGGGGAGTCCTTGAAGCTGTTCGGATAAGTCTGGCAGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTAGATCGCTTTGGGTTAATAGCCCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCTACTGAGAAAATTTTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGAGCTGGCCAAATTGGTATTTTAGACTCAAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATTCAGTGCCGACTGAGGACATTTATTGCACATAGGGATTTCATTTTAGCCAGAGCTGCTGCTTTTTCTCTTCAAGCATGCTGCAGGGGATACATTGCCCGTAAGATATATGCTGCTAAAAGGGAGACATCAGCAGCTATCTCCATTCAGAAATATATTCGTATGTGGCTTATGAGACATGCTTACTTGAAATTGTATTTATCTGCTATTATCATACAATCCCATGTTCGAGGTTTTGTGACTCGCCAAAGATTATTACATGGAAAAGAACAGAGAGCTGCTACTTTTATTCAGGCCTGTTGGAGGATGTCCAAGGTTAGGTCATCTTTCCGGCAATATCAGGCTTCAATTGTGGCAATACAAAGCCTTTGGCGGTGTAGACAAGCAAAACGAGAGCTGCGTAGACTTAAAAAAGAGGCAAATGAAGCTGGTGCCCTCCGTTTAGCTAAGAATAAACTGGAGAAGCAATTGGAAGATCTCACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCCAATGAAGAGGCTAAGAAAATCGAGATTTCCAAACTTCAAAAGATGTTAGAAGCTCTTAATCTTGAATTAGATGCAGCCAAATTGGCAAAAATCAATGAGTGGAACAAGAATGCTGATCTGCAAAATCAATTGGATTTGGCAGTAAAGGAAAAGTCTGCTCTGAAAAGAGTGCTAGTTGCTGTGGATGAATTACGAAAGGAAAATGCTCTATTAAAGGTTTCATTGGATGCATTTGAAAAGAAGTGTGCAACCTTAGAGCTTGAGCTTATGAATGCCCAAAAAGGTCAGGATGAAACCATGGAGAAGCTGAGGGAGTATGAACAAAAGTGCTCTCAACTTGAGCAAACTGTGAAAAGGCTTGAGGAAAAGATATTGAGTTTAGAGGATGAAAATCATGTGCTTCGTCAGAAAGCCTTAAGTACCCCTCTTAAGAGTAACCGTCCAGGTTTTGCCAAGTCAATGTCAGACAAATACTCAAGTGCAATCACCTCTCGCACTGAACGGAAGACGATATTTGAGTCACCCACACCTACAAAACTGATCGCCCCTTACTCACTAGGCATGTCTGACTCTCGTCGATCTAAGTTAACAGCAGAGAGGCAGCAGGATAACTATGAATTCCTCTCGAAGTGCATAAAAGAAAATCTAGGATTCAAAAATGGTAAACCAATTGCAGCTCGTATTATATACAAATGTCTACTTCATTGGCATTCATTTGAATCTGAGCGCACAACCATTTTTGATTCCATAATTGAAGGCATAAATGAGATTCTAAAGGTTAGGGATGATGACAACATCCTGCCATATTGGCTTTCCAATACCTGTGCACTTCTATGTCTCTTACAGAGGAACTTACGATCAAATGGTTTTTTAACTACTGCTGCTCAACGTTATCCTGGATCATCCGGTTTGACTAGCCGTACTGTGCATGGACCAAAGTCTCCATTAAAGTTCATTGGATATGATGACGGTGTGTCACATGTGGAAGCAAGATATCCTGCTATACTTTTTAAGCAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGTCTTCTACGTGACAATTTGAAGAAGGAACTTTCCCCACTTCTGGGATCATGTATTCAGGCACCCAAAACAGGACGTGGAGTGCATGGGGGGAAATCATCTAGGTCTCCTGGTGGAATTCCCCAACAATCATCTGGTGGTCAGTGGAGTAACATTGTCAAATTTTTGGATTCTCTCATGAGCAAACTTTGCAGAAATAATGTGCCATCCTTCTTCATCCGTAAGCTAGCTACCCAAGTGTTTTCCTTCATCAATATTACACTCTTCAACAGGTTCTTCTTTTGCGCCGGGAGTGTTGCACTTTCTCAAATGATAATACATCAGAAGTGGAAGAAATCTTTGGAAGAGATTCGGCAAGATCTTTGTCCGGTATTGACGGTAAGACAAATTTATCGAATCAGCACAATGTACTGGGATGACAAGTATGGAACCCAAAGTGTTTCCAATGAGGTAGTTAGTGAAATGAGAGAAATTGTCAGCAAGGACAATCAAAATCTTCCCTCAAATTCTTTCTTATTGGATGATGATCTGAGCATTCCTTTCTCTGCTGAAGACATAGATATGGCAATCCCTGCCATAGATCTTGATGAGATTGATCTTCCAGAGTTCGTGTCCGAATATTCTTGCGCTCAGTTTCTTAGTTCTCATCAGAAGTAGTTGGTCTATAATTTCTTGATCGTTAATGTAGCTATGCAGTTTGCTTCAATATTTAATTTCTGGATTTAGATGACAACACCACAACGGTATCCACATTGGAAACACAAGTTTCTCTTTACGTCGACAGCAGCAATATTTGTCATCCAATTTACTGTTATATTGTACACGTGATTTATATATCAACTATGGAAGAGTGATTCTCTTGGTTGGTTGGTAATTACCCCCTAAATTACAGAGTTCAACCAACTTTTTGTAATTATCCGTAGTATATGGATGACATTAAGATATGCACCCTCTTATTATTTTGCCTTCCACCAGCTTAGGTATATTTATTGTCTTTCATGCTGTCTATTTCTATGTAGGTAGGTATGAAATTGTAGCTAGGCCTGGCAAAAATGTAATTTCATTCATTGATGTAAATATTAGCCTCATTTAGTATAACCGTAAGCAATTTGTTGCTCCTTGTGTTTTGAAGCTTAGTGCTATGAATTCCGTTAATAAAACACATCCC 5078 0.3982 MNLRHGSKVWVEDRDSAWEPAEVLDSHGNRLLLVTDSGKKVYASPEKLFPRDADEEEHGGFEDMTRLAYLNEPGVLFNIRRRYALNDIYTYTGSILIAVNPFTKLPHLYDSHMMDQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCAFERDAEKYKLGHPSRFHYLNQSKIYELDGVSNVEEYLKTRRAMDIVGISHMDQEVIFRVLAGILHLGNIEFSPGKEHDSSVVKDEKSRFHMQMAADLFMCDVDLLLATLCTRSIQTREGSIIKALDCTAAVAGRDTLAKTVYARLFDWLVDKINRSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQYFRSHPRLGKEKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFISGLFRLLPEESSRSSYKFSSVAARFKQQLQALMETLKSTEPHYIRCVKPNSLNRPQIFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQCRLRTFIAHRDFILARAAAFSLQACCRGYIARKIYAAKRETSAAISIQKYIRMWLMRHAYLKLYLSAIIIQSHVRGFVTRQRLLHGKEQRAATFIQACWRMSKVRSSFRQYQASIVAIQSLWRCRQAKRELRRLKKEANEAGALRLAKNKLEKQLEDLTWRLHLEKKIRVSNEEAKKIEISKLQKMLEALNLELDAAKLAKINEWNKNADLQNQLDLAVKEKSALKRVLVAVDELRKENALLKVSLDAFEKKCATLELELMNAQKGQDETMEKLREYEQKCSQLEQTVKRLEEKILSLEDENHVLRQKALSTPLKSNRPGFAKSMSDKYSSAITSRTERKTIFESPTPTKLIAPYSLGMSDSRRSKLTAERQQDNYEFLSKCIKENLGFKNGKPIAARIIYKCLLHWHSFESERTTIFDSIIEGINEILKVRDDDNILPYWLSNTCALLCLLQRNLRSNGFLTTAAQRYPGSSGLTSRTVHGPKSPLKFIGYDDGVSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGSCIQAPKTGRGVHGGKSSRSPGGIPQQSSGGQWSNIVKFLDSLMSKLCRNNVPSFFIRKLATQVFSFINITLFNRFFFCAGSVALSQMIIHQKWKKSLEEIRQDLCPVLTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLPSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIDLPEFVSEYSCAQFLSSHQK 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00406 1478 Gene3D - 435 620 - -
Pste8g00406 1478 ProSiteProfiles IQ motif profile. 806 832 IPR000048 GO:0005515
Pste8g00406 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 777 IPR027417 -
Pste8g00406 1478 ProSiteProfiles Dilute domain profile. 1159 1478 IPR002710 -
Pste8g00406 1478 Gene3D - 830 879 - -
Pste8g00406 1478 Gene3D - 782 829 - -
Pste8g00406 1478 Gene3D - 731 781 - -
Pste8g00406 1478 Coils Coil 864 901 - -
Pste8g00406 1478 FunFam Myosin heavy chain 249 303 - -
Pste8g00406 1478 ProSiteProfiles IQ motif profile. 780 806 IPR000048 GO:0005515
Pste8g00406 1478 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Pste8g00406 1478 Coils Coil 948 968 - -
Pste8g00406 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 878 IPR027417 -
Pste8g00406 1478 PANTHER MYOSIN 805 1410 - -
Pste8g00406 1478 Gene3D Kinesin motor domain 62 659 IPR036961 -
Pste8g00406 1478 Pfam Myosin head (motor domain) 62 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 Coils Coil 913 940 - -
Pste8g00406 1478 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Pste8g00406 1478 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 Gene3D - 664 730 - -
Pste8g00406 1478 MobiDBLite consensus disorder prediction 1284 1306 - -
Pste8g00406 1478 Gene3D - 249 306 - -
Pste8g00406 1478 Pfam IQ calmodulin-binding motif 830 849 IPR000048 GO:0005515
Pste8g00406 1478 Pfam IQ calmodulin-binding motif 781 800 IPR000048 GO:0005515
Pste8g00406 1478 Pfam IQ calmodulin-binding motif 756 775 IPR000048 GO:0005515
Pste8g00406 1478 Pfam IQ calmodulin-binding motif 806 823 IPR000048 GO:0005515
Pste8g00406 1478 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Pste8g00406 1478 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste8g00406 1478 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Pste8g00406 1478 SMART iq_5 779 801 IPR000048 GO:0005515
Pste8g00406 1478 SMART iq_5 850 872 IPR000048 GO:0005515
Pste8g00406 1478 SMART iq_5 754 776 IPR000048 GO:0005515
Pste8g00406 1478 SMART iq_5 827 849 IPR000048 GO:0005515
Pste8g00406 1478 SMART iq_5 802 824 IPR000048 GO:0005515
Pste8g00406 1478 SMART iq_5 731 753 IPR000048 GO:0005515
Pste8g00406 1478 Coils Coil 972 1048 - -
Pste8g00406 1478 CDD MYSc_Myo11 73 717 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00406 Pste-Chr8 2114591 2152661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00406 1 1473 Myosins gene family AT4G33200 69.444 0.0 2135