Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00394 TCTGCATGTTTCCAAATTTATCTTCTTCTCCACATCCTTATCCTTCCAATAATAGTTGAATCATTTTCCTTCAACATAACCCATTTCAACGATGCTGAAAGCACAAGCCTCATATTTGGAGGTGAAAGCAGAGTTGAGAACGGAACTATAGTGCTCAACTCATTAACCAAAAATGGAGTTGGAAGAGCCATCTATGGCCAACCTCTACGCTTCAAACACACTAATTCTAACGGGATTGTCACAGTCACAGACTTCTCTACTAGTTTCTCATTCACTATCGATGTGACCAACAAAACTTACTATGGTGATGGTTTTGCCTTCTACATGGCACCACATCCCTATCAGATTCCTTCTACTTCAGCTGGTCGAAGACTTGGCCTTTACAATGACAACGCACCCTACAATAAAATCATCGCTGTGGAATTTGACACTTATGTAAACTCCATTGTTGATCCATCAATGCGGCATGTGGGGATCAACAACAACTCTGTGGTATCCCTCGCTTATGCCAAGTTTGATATTGAGAACAACATAGGGAACATGGGGCATGTGTTCATAACTTACAATGCTTCTACCAAACTCCTTTCTGTCTCGTGGTTCTTTGAGGGAACTAGTTCTGGTTTTAGGCCTAATAATGCTTCTCTTTCACACCGGATTGACCTTGGGGAAACTCTACCAGAGTGGGTCAGTATTGGGTTTTCTGGTGCAACTGGGTCAGATGTTGAGAAAAACGTTATTCATTCCTGGGAATTCAGTTCAACTCTGAATTCCACGCACTTTGAGGTGAACAAAGAAAATGATGGCATAACTATTAAGATTGTAGTTGTTGTGGTGACTTGTTCTATTTTTCTTGTGCTTGTGGTTATTTGTGTTTCTTGGTTGATCGTCAAGAAGAGAAGAAATGATGATGGTTATGATTTGGATAGAGAAGCTATACCTAGAAGATTTGATTACAAAGAACTAGTAGCAGCCACCAACGGATTCCCAGATGATAAAAGACTTGGAAGAGGAGGCTCGGGACAGGTTTACAAAGGAGTTCTGAGTTATTTAGGAAGGGTTGTTGCTGTCAAAAGAATTTTCCCTGACTTTGAAAATTCAGAGAGAGTTTTCATCAACGAGGTTAGGATCATAAGTCGTCTTATACATAGAAATTTGGTGCAGTTCATAGGGTGGTGCCACGAGCAAGGAGAGTTTTTGTTGGTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGAGAAAAAAGCTTTGCCCTGGGATGTTAGGTACAAGGTAGCTTTAAGCGTGGCTTTAGCACTTCGCTATCTTCATGAGGATGCAGAGCAAAGTGTTCTTCATAGGGATATTAAGTCAGCAAATGTGTTGTTGGACACGGATTTTAGCACCAAACTTGGCGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTGAAGACTCAGAAGACAGGTGTGGTAGGGACCTATGGGTACCTTGCCCCAGAATATATAAACGGAGGTAGGGCCAGTAAGGAATCAGACATATATAGTTTTGGGGTAGTGGCTCTTGAAATTGCATGTGGAAGGAGGACTTACAAAGATGGGGAGTTTCATGTGCCTCTTGTGAATTGGGTGTGGCAAGAGTATGTTGGAGGGAATGTTCTGAATGTTGTTGATGAGAAACTGAACAAAGAGTTTAATGTGGATGAAATGAAAAGCTTGATTGTTGTCGGGTTGTGGTGCACTAACCCAAACAACATGGAAAGACCAAAGGCTGCAGATGTAATTAATGTTCTTCAGCTTCAAGCACCATTGCCAGTGCTTCCACTTGATATGCATGATCTTCCTCCTCCTTCTATAATAATAATCAAAATCATGGCTACCTCAGCATGTTTTCAGCACCTTAAAACTTTTCTTATTTTGTGCATCCTAATGATCCTTGTTCCAATAGTTCAACCACAACCACTTTCCTTCAGCATAAAGAATTTCAACGATACTAGAATTGCAAGCCTCATTGGGTGTGTAGGCGTGGCCAGCATTGGCAACGGAACCATAATACTCAACCCACTCAACAACACTGGAATTGGACGAGCCATCTATGGTCAACCTCTGCACCTCAAAAACTCTTCTAACGGACATGTCACAGATTTTTCGACTCGCTTTTCATTCTCTATCGATGTGTCCAATGAAAACAACTATGGTGATGGCTTTGCCTTCTATATGGCACCCCTTGCCTATCATATTCCAGAGGGCGCGGATGGTGGTCGTCTTGGGATATACGGTGACAAAGTACACGACCCAACTAACATTGTTGCTGTCGAATTTGACACTTTTGAAAACTCTGGTTTTGATCCTCCGAACAACATAGGAAACATGGGGCATGTGTTGATATTTTACAATGCTTCTGCCAAACTCCTTGATGTCTCCTGGTTCTTTGAGGGAGCTAGTTCTAGTTTTACGCCAAATGCTTCTCTTTCGCATCAGATTGACCTCGGGGAGCTTCTACCTGAGTGGGTTACCGTTGGATTTTCAGGTGCAACTGGGGGTTCAGAAGAGAAAAATGTTATCCATTCCTGGGAATTCCATTCAACTCTGGACCTAAAGTTCGTGGATCAAGAGGTAAACAAAGACATCATAACCAAAGACAAGTTTCAAGTCAAAGTAGTTGTTGTTGCTGTGACTTGTTCTACTATCTTTCTAGTTGTGGTTCTTGGTGTTTCTTGGTTCATCATCAAGAGAAGAACAAAGGGTGGTTTTGATTTGGAATTGGATAGAAGGGCCATGCCTAGAAGGTTTGGTTACAGCGAGTTAGTAGCAGCCACCAACGGGTTTGCAGATAATAGGAGGCTTGGTGAAGGTGGCTATGGACAAGTTTACAAAGGGGTTGTGAGTGATTTAGGGTGCGAGGTTGCGGTGAAAAGGATTTTTTCTGATGTTGAAGATTCAGAGGAAATATTTACGAACGAGGTGAAGATTATAAGTCGCCTTATGCATAGAAACCTTGTGCAATTCATGGGGTGGTGCCACGAGGAAGGAGAGTTGTTACTGGTTTTTGGGTACATGGTTAATGGAAGCCTTGACACTCATCTCTTTGGCAACAGAAGAACTTTGACATGGGATGTGAGATACAAGATAGCGTTAGGTGTGGCTAGAGCACTTCGTTATCTTCATGAAGGTGCGGAGCAATGTGTTCTTCATAGGGATATTAAGTCAGCTAATGTTTTGTTAGACACAAATTTCAATACAAAGGTTAGTGACTTTGGGGTGGCAAAGTTGGTGGATCCAAGATTGAGGACTCAGAAGACAAGGGTGGTAGGAACATATGGGTATTTGGCTCCGGAATATGTAAAAGATGGAAGGGCTAGCAAAGAATCAGACATGTATAGTTTTGGTGTTGTGGCTTTGGAAATAGCATGTGGAAGGAGGACCTACCAAGATGGAGAGTATAACCATGTGCCTTTGACCAATTGGGTATGGAAACACTACATGGATGACAATATTTTGAATGCTGCTGATGCGAGATTGAAGAGGGATTTTGATGAGAATGAAATGACATGTTTGCTCACTGTAGGAATATGGTGTACCCACCCAGACCACAAGAAAAGGCCAAATGCAGAACAGGTTATTAATGTTCTCAAACAAGAAGTGTCACTGCCAATACTTTCTGTA 3657 0.4206 SACFQIYLLLHILILPIIVESFSFNITHFNDAESTSLIFGGESRVENGTIVLNSLTKNGVGRAIYGQPLRFKHTNSNGIVTVTDFSTSFSFTIDVTNKTYYGDGFAFYMAPHPYQIPSTSAGRRLGLYNDNAPYNKIIAVEFDTYVNSIVDPSMRHVGINNNSVVSLAYAKFDIENNIGNMGHVFITYNASTKLLSVSWFFEGTSSGFRPNNASLSHRIDLGETLPEWVSIGFSGATGSDVEKNVIHSWEFSSTLNSTHFEVNKENDGITIKIVVVVVTCSIFLVLVVICVSWLIVKKRRNDDGYDLDREAIPRRFDYKELVAATNGFPDDKRLGRGGSGQVYKGVLSYLGRVVAVKRIFPDFENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEYMPNGSLDTHLFGEKKALPWDVRYKVALSVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLKTQKTGVVGTYGYLAPEYINGGRASKESDIYSFGVVALEIACGRRTYKDGEFHVPLVNWVWQEYVGGNVLNVVDEKLNKEFNVDEMKSLIVVGLWCTNPNNMERPKAADVINVLQLQAPLPVLPLDMHDLPPPSIIIIKIMATSACFQHLKTFLILCILMILVPIVQPQPLSFSIKNFNDTRIASLIGCVGVASIGNGTIILNPLNNTGIGRAIYGQPLHLKNSSNGHVTDFSTRFSFSIDVSNENNYGDGFAFYMAPLAYHIPEGADGGRLGIYGDKVHDPTNIVAVEFDTFENSGFDPPNNIGNMGHVLIFYNASAKLLDVSWFFEGASSSFTPNASLSHQIDLGELLPEWVTVGFSGATGGSEEKNVIHSWEFHSTLDLKFVDQEVNKDIITKDKFQVKVVVVAVTCSTIFLVVVLGVSWFIIKRRTKGGFDLELDRRAMPRRFGYSELVAATNGFADNRRLGEGGYGQVYKGVVSDLGCEVAVKRIFSDVEDSEEIFTNEVKIISRLMHRNLVQFMGWCHEEGELLLVFGYMVNGSLDTHLFGNRRTLTWDVRYKIALGVARALRYLHEGAEQCVLHRDIKSANVLLDTNFNTKVSDFGVAKLVDPRLRTQKTRVVGTYGYLAPEYVKDGRASKESDMYSFGVVALEIACGRRTYQDGEYNHVPLTNWVWKHYMDDNILNAADARLKRDFDENEMTCLLTVGIWCTHPDHKKRPNAEQVINVLKQEVSLPILSV 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00394 1219 FunFam L-type lectin-domain containing receptor kinase IX.1 313 404 - -
Pste8g00394 1219 SUPERFAMILY Protein kinase-like (PK-like) 312 613 IPR011009 -
Pste8g00394 1219 Gene3D - 788 885 - -
Pste8g00394 1219 Gene3D - 19 277 - -
Pste8g00394 1219 ProSiteProfiles Protein kinase domain profile. 328 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00394 1219 CDD lectin_legume_LecRK_Arcelin_ConA 22 255 IPR001220 GO:0030246
Pste8g00394 1219 ProSitePatterns Legume lectins alpha-chain signature. 225 234 IPR000985 -
Pste8g00394 1219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1060 1072 IPR008271 GO:0004672|GO:0006468
Pste8g00394 1219 Gene3D Phosphorylase Kinase; domain 1 925 1016 - -
Pste8g00394 1219 Gene3D Phosphorylase Kinase; domain 1 313 404 - -
Pste8g00394 1219 SUPERFAMILY Protein kinase-like (PK-like) 924 1208 IPR011009 -
Pste8g00394 1219 ProSitePatterns Legume lectins alpha-chain signature. 831 840 IPR000985 -
Pste8g00394 1219 ProSitePatterns Legume lectins beta-chain signature. 767 773 IPR019825 -
Pste8g00394 1219 FunFam L-type lectin-domain containing receptor kinase IX.1 1017 1218 - -
Pste8g00394 1219 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Pste8g00394 1219 ProSiteProfiles Protein kinase domain profile. 940 1217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00394 1219 FunFam L-type lectin-domain containing receptor kinase IX.1 925 1016 - -
Pste8g00394 1219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pste8g00394 1219 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Pste8g00394 1219 CDD lectin_legume_LecRK_Arcelin_ConA 652 861 IPR001220 GO:0030246
Pste8g00394 1219 FunFam L-type lectin-domain containing receptor kinase IX.1 405 605 - -
Pste8g00394 1219 ProSitePatterns Protein kinases ATP-binding region signature. 946 969 IPR017441 GO:0005524
Pste8g00394 1219 Gene3D Transferase(Phosphotransferase) domain 1 1017 1217 - -
Pste8g00394 1219 Gene3D Transferase(Phosphotransferase) domain 1 405 606 - -
Pste8g00394 1219 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 260 IPR013320 -
Pste8g00394 1219 PANTHER - 47 599 - -
Pste8g00394 1219 Pfam Protein kinase domain 941 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00394 1219 Pfam Protein kinase domain 330 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00394 1219 Gene3D - 650 787 - -
Pste8g00394 1219 SUPERFAMILY Concanavalin A-like lectins/glucanases 652 866 IPR013320 -
Pste8g00394 1219 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00394 1219 SMART serkin_6 940 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00394 1219 Pfam Legume lectin domain 790 862 IPR001220 GO:0030246
Pste8g00394 1219 Pfam Legume lectin domain 22 257 IPR001220 GO:0030246
Pste8g00394 1219 Pfam Legume lectin domain 652 784 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00394 Pste-Chr8 2031388 2039763 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00394 6 608 Receptor kinase-like Gene Family AT5G10530 43.631 6.45e-157 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g00394 Pkinase 3.1e-51 CL0016