Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00390 TGTCTGTTGGTGTTTGAGTTCATGCCTAATGGAAGCCTCGACACGCATCTCTTTGGGGAGAAGAGAACTTTGGCATGGGATGCGAGGTACAAAGTAGCGTTAAGTGTGGCTTTGGCAGTTCGTTATCTTCACGAGGATGCGGAACAGAGAGTTCTTCATAGGGATATTAAATCGGCTAATGTGTTGTTGGACACAGATTTTAGTGCCAAGCTTGGTGATTTTGGGGTGGCAAAGTTGGTGGATCCAAGGTTGAAGACTCAAAGAACAGGGTTGGTGGGGACTTCTGGTTACCTTGCCCCAGAATATATCAACGATGGTAGGGCTAGCAAGGAATCAGACATTTATAGTTTTGGGGTCTTGGCTCTTGAAATTGCATGTGGAAGGAGGACTTATGAGGATGGTGACTTTCATGTGCCTCTCATGAATTGGGTGTGGCAACTATATGTGGAAGGACGGGTTATGGATGCTGTTGATGAAAGATTGAACAAAGAGTTTGATGTGGATCAAATGAAAAGCTTGCTCATTGTGGGGTTATGGTGTACTAATCCAAACGACAAGGAAAGGCCCAAGGCTGCACAAGTAATAAAGGTTCTTCGGCTTGAAGGACCATTGCCAGAGCTTCCACTTGATCTGCATGATCGTCCTCCTATTTCTATAGAAACTCATAAGCATGCAGAACCCACTTATGATTCCTTGCAACCACCTTTAACTAACAGCTTTACAAGTGTTGGACGTTAA 738 0.4444 CLLVFEFMPNGSLDTHLFGEKRTLAWDARYKVALSVALAVRYLHEDAEQRVLHRDIKSANVLLDTDFSAKLGDFGVAKLVDPRLKTQRTGLVGTSGYLAPEYINDGRASKESDIYSFGVLALEIACGRRTYEDGDFHVPLMNWVWQLYVEGRVMDAVDERLNKEFDVDQMKSLLIVGLWCTNPNDKERPKAAQVIKVLRLEGPLPELPLDLHDRPPISIETHKHAEPTYDSLQPPLTNSFTSVGR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00390 245 FunFam L-type lectin-domain containing receptor kinase IX.1 8 208 - -
Pste8g00390 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Pste8g00390 245 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00390 245 PIRSF ILK 1 201 - -
Pste8g00390 245 SMART serkin_6 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00390 245 Pfam Protein kinase domain 2 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00390 245 MobiDBLite consensus disorder prediction 224 245 - -
Pste8g00390 245 Gene3D Transferase(Phosphotransferase) domain 1 8 202 - -
Pste8g00390 245 SUPERFAMILY Protein kinase-like (PK-like) 2 222 IPR011009 -
Pste8g00390 245 PANTHER - 2 199 - -
Pste8g00390 245 MobiDBLite consensus disorder prediction 231 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00390 Pste-Chr8 2021011 2022275 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00390 2 211 Receptor kinase-like Gene Family AT5G10530 54.884 2.52e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g00390 Pkinase 3.6e-32 CL0016