Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00381 AAACCATGTTGGCCACCTCGAAACAACATAGGGAATTTGGGTCATGCGTTGATAACTTACAACGGTGCTTCCAAACTCCTTTCTGTGTGGTGGTTCTTTGAGGGAACTAGTTCTGGTAATTCTATGCCCAACACTTCTCTTTCATACCGGATTGACCTTGGGGAATTACTTCAACCTGCTGGGTGGGTCAGTGTGGGGTTTTCGGGTTCAACCGGGTCGTCAAGTGAGGAAAATGTTATTCATTCATGGGAATTCTCGTCCACGCATTCAGAATTAGAGGTAAACAAAGAAAAACCTGACTCGGTAGGTAAATGCAACTTTCAAGTAAAAGTAGTAGTTGTTGCAGTGACTTGTTCTATTGTTATTGTGCTCCTGGTCGCTGGAAAGAAAAGCGATGATTGTTTTGATTTTGATAAAGAGTCCATGCTGAGAAGGTTTGGTTATAAGGAATTAGTTGCTGCCACCAACGGGTTTGCAGACGATAGAAAGCTGAGAGAGGGTGGCAGTGGACAAGTTTACAAAGGGTTTATGAGAGACCTAGGGCGCGTGGTTGCGGTGAAAAAGATTTTTTCTGATGTTGAAGATTCTGAGAGAATATTCAGGAACAAAGTGAAGATTATAAGCCGTCTTATACATAGAAACCTTGTGCAGTTCATGGGATGGTGCCAGGAGCAAGGGGAGTTGTTACTGGTTTTTGAGTACATGCCTAATGGAAGTCTTGACACTCATCTTTTCCGAAACAGAAGAATTTTGAAATGGGGTGTGAGGTACAAGATAGCGTTAGGTGTGGCTAAAGCGCTTCAATATCTTCATGAAGACGCCGAACAGTGTGTTATTCATAGGGATATTAAGTCAGCTAATGTTTTGTTAGACACAGATTTCAATACCAAGGTTAGTGACTTTGGGATGGCAAAGTTGGTGGACCCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGGACTTACGGTTACCTAGCTCCGGAATACGTAAAGCAAGGAAGGGCTAACAAAGAATCAGATATTTACGGTTTTGGCGTTGTCGCTTTGGAGATAGCATGTGGAAGGAGGACTTACAAGGATGGAAATCACGATCATGTCCCTTTGCCCAATTGGGTACGGAAACATTATGTGGGTGGAAGCATTTTGAATGTTGCTGATGAAGGATTGAATGGAGATTTTGATGACAATGAAATGACGTGTTTGCTTTTTGTGGGACTATGGTGCACCCATCAAGACCATAAGAAAATACCAAGGGCAGAACAGGCGTCTGGCACCGCCTCTGTTTGTGACTCCCTCCGCGGCTCCGCCACACACCATCGCCACCCACCCTCACGGCCTCACCGTTGGATACTGTCAATGACCACTACGAGATTTTGTTATCCTTTCTTCCTCGCTCTGTTCGAAATTCGAAGTGAAACATCAACAGAGGCTGGTCACTCTTCTATCGCTATTCAATGGTACTTGGACCTTGAAAATATGAAAGTAATAAACTTTTCTGGTAGCATAGCAAAACCCAGTTTTTTTATTGGCCAAACGGAAATGCCTATTCTAACATTTGGTCACTGTAAGATGAGTGCTACCCTAGCTCTTCGGTTGCCTCGTGACTGCATTAGGAGGAGGATGGGGTGGATTACAAAAGTTCAATATTCTGTTGCTGATAGAACATTGAGTTCTGGTTCCACGGATTCGCTGGCTTCTAATTCGGAATCTGGAAGAATGAATAGGAGGAGAGGAGGGTCTTCATCGCTGTATACCCGTCCTAGTTTAGCAGAAATGAAGAAGGAGAGGGCAGCAATAAGGAAAAAAGTTTATGAGTTCTTGAGGGAAATTGGCATTGTTCCTGATGAGCTTGATGGTCTTGAACTTCCTGTGACTGTTGATGTTATGAGGGAGCGAATAGATTTTCTTCACAGTTTGGGGCTTACAATTGAAGACATCAATAACTATCCACTTGTTCTTGGGTGCAGTGTCAAGAAGAACATGATTCCTGTGCTTGATTACCTAGGAAAATTGGGAGTTAGGAAATCCACAATTACACAGTTCTTGCAAAGATACCCACAAGTGCTCCATGCTAGTGTGGTTGTGGATCTTATGCCGGTGGTCAACTATCTTAAGGGGATGGATATCAGGCCCGATGATATTCCTCGTGTTCTTGAGAGGTACCCTGAAGTGCTTGGATTCAAACTTGAGGGAACCATGAGCACGTCGGTTGCTTATTTGATTGGAATTGGCATGGGAAGAAGAGAAATTGGAGGTGTGTTAACTAGATACCCAGAGATTTTGGGGATGCGGGTTGGTAGAATCATCAAGCCTTTTGTGGAATATCTGGAAAGCTTGGGAATTCCAAGGTTAGCCATTGCTAGACTGGTAGAGCAACGACCTTATATTCTTGGATTTGATCTGGATGAGAGGGTGAAGCCAAATGTTAAATCCCTTGAAGAGTTTAATGTTAGGCGAACATCACTTCCATCTATCATTGCTCAATATCCTGACATCATTGGAACTGACTTAAATCCAAAGCTTGTCAAACAGAGAAGTTTACTCAATTCTTTACTTAATTTGGATCCTGAGGACTTTGGTCGAGTTGTTGAGAAGATGCCACAATTAGTTAACCTCAGCAGAGGACCTATGCTGAAGCATGTTGATTTTCTTAAGGAGTGTGGCTTTTCCATGCCACAAATGAGGAAGATGATTGTTGGATGCCCTCAAGTACTAGCGTTAAACATTGACATTATGAAACTTAGCTTTGATTACTTCCAAATAGAAATGAAAAGGCCTTTGGAAGACTTGGTCACTTTCCCTGCATTCTTCACTTATGGTTTGGAGTCAACTGTAAAGCCTAGGCATATGATGGTTGTCAAGAAAGGGTTGAAGTGTTCTCTGTCATGGATGCTTAATTGTTCTAATGAGAAATTTGAGCAACGAATGGACTATGACACTATTGACATGGAAGAGATGGAAATGGAATCATCGTTTGACATGGCTTCACTGACACAACCAAGGAGTGATGAATCAGATTTTGATTATGAAGACAGTGATGAAGATACTGAGTTTGGGGTTGTGGTTTTGGAAATAGCACGTGGAAGGAGACCTACCAGGATGGAGGGTATAACCACACGTGCCTTTGATGAATTGGATATGGAAACATTACATGGATGGAATATTTTGAATGCTGTTGATGAGGAATTGAAGAGGGATTTTGATGACAATGAAATGACATGTTTTGCTCACTGTGGGAAT 3240 0.4253 KPCWPPRNNIGNLGHALITYNGASKLLSVWWFFEGTSSGNSMPNTSLSYRIDLGELLQPAGWVSVGFSGSTGSSSEENVIHSWEFSSTHSELEVNKEKPDSVGKCNFQVKVVVVAVTCSIVIVLLVAGKKSDDCFDFDKESMLRRFGYKELVAATNGFADDRKLREGGSGQVYKGFMRDLGRVVAVKKIFSDVEDSERIFRNKVKIISRLIHRNLVQFMGWCQEQGELLLVFEYMPNGSLDTHLFRNRRILKWGVRYKIALGVAKALQYLHEDAEQCVIHRDIKSANVLLDTDFNTKVSDFGMAKLVDPRLRTQKTKVVGTYGYLAPEYVKQGRANKESDIYGFGVVALEIACGRRTYKDGNHDHVPLPNWVRKHYVGGSILNVADEGLNGDFDDNEMTCLLFVGLWCTHQDHKKIPRAEQASGTASVCDSLRGSATHHRHPPSRPHRWILSMTTTRFCYPFFLALFEIRSETSTEAGHSSIAIQWYLDLENMKVINFSGSIAKPSFFIGQTEMPILTFGHCKMSATLALRLPRDCIRRRMGWITKVQYSVADRTLSSGSTDSLASNSESGRMNRRRGGSSSLYTRPSLAEMKKERAAIRKKVYEFLREIGIVPDELDGLELPVTVDVMRERIDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTITQFLQRYPQVLHASVVVDLMPVVNYLKGMDIRPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGMGRREIGGVLTRYPEILGMRVGRIIKPFVEYLESLGIPRLAIARLVEQRPYILGFDLDERVKPNVKSLEEFNVRRTSLPSIIAQYPDIIGTDLNPKLVKQRSLLNSLLNLDPEDFGRVVEKMPQLVNLSRGPMLKHVDFLKECGFSMPQMRKMIVGCPQVLALNIDIMKLSFDYFQIEMKRPLEDLVTFPAFFTYGLESTVKPRHMMVVKKGLKCSLSWMLNCSNEKFEQRMDYDTIDMEEMEMESSFDMASLTQPRSDESDFDYEDSDEDTEFGVVVLEIARGRRPTRMEGITTRAFDELDMETLHGWNILNAVDEELKRDFDDNEMTCFAHCGN 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00381 1080 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Pste8g00381 1080 Pfam Protein kinase domain 160 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00381 1080 ProSiteProfiles Protein kinase domain profile. 158 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00381 1080 Gene3D Transferase(Phosphotransferase) domain 1 235 432 - -
Pste8g00381 1080 SMART mt_12 679 710 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 715 746 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 860 890 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 751 782 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 823 855 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 787 818 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 927 958 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 895 926 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SMART mt_12 643 674 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 SUPERFAMILY Concanavalin A-like lectins/glucanases 11 179 IPR013320 -
Pste8g00381 1080 Gene3D - 4 102 - -
Pste8g00381 1080 MobiDBLite consensus disorder prediction 557 585 - -
Pste8g00381 1080 FunFam Transcription termination factor MTERF4, chloroplastic 767 981 - -
Pste8g00381 1080 Pfam mTERF 665 973 IPR003690 GO:0003690|GO:0006355
Pste8g00381 1080 FunFam L-type lectin-domain containing receptor kinase IX.1 143 234 - -
Pste8g00381 1080 Gene3D Transcription termination factor 3, mitochondrial 770 982 IPR038538 -
Pste8g00381 1080 Gene3D Transcription termination factor 3, mitochondrial 631 769 IPR038538 -
Pste8g00381 1080 SMART serkin_6 158 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00381 1080 Pfam Legume lectin domain 15 95 IPR001220 GO:0030246
Pste8g00381 1080 Gene3D Phosphorylase Kinase; domain 1 142 234 - -
Pste8g00381 1080 SUPERFAMILY Protein kinase-like (PK-like) 142 428 IPR011009 -
Pste8g00381 1080 PANTHER - 16 422 - -
Pste8g00381 1080 FunFam L-type lectin-domain containing receptor kinase IX.1 235 431 - -
Pste8g00381 1080 FunFam Transcription termination factor mterf4, chloroplastic 629 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00381 Pste-Chr8 1981508 1992578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00381 4 422 Receptor kinase-like Gene Family AT5G10530 42.404 1.81e-108 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g00381 mTERF 5.1e-106 No_clan
TR mTERF Pste8g00381 mTERF 5.1e-106 No_clan