Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00379 ATGGAGGACGATCCCAAACCGCTTCAGAATGGCGCCAAGAAGCCCAAACTGGACGACGCTGAATTGAAGAGAGTGGCGGAGATTGTGCTCGTTCTCTCCTCCATGGCCACCGTCCGCGCCGGCAGGAAGCCTTCCGACGCCGAGGTCGACCTCATGAAGGAGGCTCGCTCCAAGCTCGCCAACCTCTGCCAGGGTTTCGCTCCCAAGGATATTGTCGCCAGAGAGGCTATTGGCACCGTAATTGATGATCTCGGCTTGCACTCCAAGCTCAAGGACCACCGATTAGGGTTTCGATCTCCCAAGATGTCCATTGCCGAGAGGTATTCCCATGCCAAGTGGAAGGCTAGTACTCCGTTATTTTTCAGTTTCGTTCGTGTTGCCGCTCTTATTAATCTTAAACCACCTTCTCGGCTGGGCTTTTTTGAGTTTGTTGGAATCTTGAACTCTAAGAGCATTTATTTATTTATAATGGAAGAAGCAAAGAAATTTGCTGCAGCTCCTACACCTTCTATAGCACATACATCTCAGCCCTTGCAAACAAACATCGGTGGCCCAGTTGACAATCGTGTCCCATCACATGTCGTTCGAATTTTTCCTTCTGATAAATCAAGCCATCCAGCAATTCCTTCTATGGGTACTGTAGTGTCTATTCCTGCCCATGTTTCTGCAGGATCTTCTGCAGCATTGCAATATCAAACAGCCAGCAATGATATCAGACCACCAGGAGTTTCTGGTGTGATGCCTAGCAGTCACTTGGGGAGAAATTCATCTTCCTTAGCATTGCCTAAAGTTGAACACCCTCAGTTCAAAGTTGATGGAGGATCAAATGGGTCTTCTTATATGCTGCAAGTCCAAGCAAATTCATCAGCGAACCAACCTTGGGTAAATGCTCCAACATGGTCTATACAGACTCAAGCTGCTTCATTAGCTAGAAGTGCATCTGAGAACAAGGTGCCTGCTCTTAACTCTGTCAAGATTGAAGGAACACCTGACATAACTGTATCAAGGGCAGGGCCACAATTTACAACAGACCAGAGTTTTAGACCATTTATCACTCAAACAGCTCCTGGAAATTTGCCTAGTGTGCAGCAGCCATTGCATGCCACGAACATTGTTCAGCCTCCTTCAATTCCTAGTCACTCTGATATTGCAAAGATTGTACAGAAAGTGTTACAACCAAAGCTTCCTGACCATCCCACGTGGACTCCTCCATCAAGGGATTACATGAATAAGGCTTTGACATGTCAGGTGTGTGAGCTCAGTGTCAACGAGGTTGATACTGTACTTCTCTGTGATGCTTGTGAAAAGGGATTTCACTTGAAGTGCCTGCAGCCATCGGTCTTGAGAGGAATTCATAATAGAGTGGATTGGCACTGTATGAGGTGCTTGAGTTTAAGTGGTGGAAAGCCATTGCCACCAAAATATGGTCGTGTCATGAGATCCTCAAACACACCACCAAAATTGCCCTCTAACACAGGCGGTATTCAACCATGTTCTGAGAAGAAAGCAGAGAACATAGATCCAAAGGTCATCTCGCAGACGCTAACAACAAATGGGTACTCTGTTCCAACTGTTTCCAGTGGCAATCTCAATGTCGAACTGCCATCTGATTCGAAGATTCCAGATACCAAAGATATGCAAGGAATTGACATTTCATCTAGAATTGAAACTATTGATAAGAAGCCTGATCCCAACAACTCTATGACATATCTAAGTTCTAGTCCTTGTCCTTCGACTGGGTTGCTTGGTGAAAATTCTTCTCTACTAATAAATTCTAAGGTTATGACCGGTAAAGAAATTTCGGAATCCAAGTCGCTTCCTAAATTATGCGAGCAGGCTAAATGTGAAAATTTGCAATCATCACAAGATATTCAAGTTGAACAGATAATGTCACAGGACAATGCTGAAGTGTCATCAGATAAACACATTGAGAGTAATATTATGAATAATAAACAGAAGGAATTTCATGGAGGAGAAAATTTAACTTACGATATCAAGCGTGATGACCAAAATGCTGCACTTGCAAACTTCGTTGGAACTTCTGGAACCAATATTGAAAGTAGACAGTACTCTGCATTATCTTCAGATAGTTCACCTGCTGTAGAATGGATTGGTGATGTGTCTATGTGGGAAGATTGTAAAACTGGGTTAAAGTGGGTTAAGGTGACAAAGTGCTACTTTCCTGATGATTTGCCTGGGAATATTGGTCATCCCTGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTGATAGAACTGAAATGGCTAGCTCTATTCAAGGCCCATGTGAAGTCCTCCCATCTGATAAATTTAAACAAGAAAATGACCGGCGATGTCAGTTAGGAATTGAGGAAAGGTCTAGAGTACGGCCCATTTTCCTTTGCAGGTGGTTTTATGATGAATTCAAAAAGTTATTCCAACCTGTATTTGGGGGTTTTCGAACAGGATTTTTCATGTATGGGTGGATAATTGAGCATGTATTCATGGTAGAGCCATCATAAGGCACATTGCAGCGGATTGCCTCCTTGTACAAGAATGCTCAATCGTTTCAGCATGAATTGCATTTGATGTAAAATACGTAGTTGGAGCTGTGGACTGCTTAGTTTAGCTTTCGTTTTGGTAGTTCTTTTCCCGATAGATATTCATTCTGTATAATTCTTTTTTGGGCATTATGCTCTTTAGACCCAATAATTACATTAATATCTTTGAATTAGATTGCTGTTGTTCCCTTAGTTTTGCTGGAATTGTAAGATACTTAATTTGTACAAAAAAGTAATTTCTTCTGAAACCTTGGGAATTTCGTTAATCATTATATCAATTTGGCGACCAGTGATGATTTTAATAGCTATCGCCAGGGCTTTAGTTGTTCATAGGTGTTCATAGGTGTTGTTCTATTGCTTTAGTTGTTG 2913 0.4216 MEDDPKPLQNGAKKPKLDDAELKRVAEIVLVLSSMATVRAGRKPSDAEVDLMKEARSKLANLCQGFAPKDIVAREAIGTVIDDLGLHSKLKDHRLGFRSPKMSIAERYSHAKWKASTPLFFSFVRVAALINLKPPSRLGFFEFVGILNSKSIYLFIMEEAKKFAAAPTPSIAHTSQPLQTNIGGPVDNRVPSHVVRIFPSDKSSHPAIPSMGTVVSIPAHVSAGSSAALQYQTASNDIRPPGVSGVMPSSHLGRNSSSLALPKVEHPQFKVDGGSNGSSYMLQVQANSSANQPWVNAPTWSIQTQAASLARSASENKVPALNSVKIEGTPDITVSRAGPQFTTDQSFRPFITQTAPGNLPSVQQPLHATNIVQPPSIPSHSDIAKIVQKVLQPKLPDHPTWTPPSRDYMNKALTCQVCELSVNEVDTVLLCDACEKGFHLKCLQPSVLRGIHNRVDWHCMRCLSLSGGKPLPPKYGRVMRSSNTPPKLPSNTGGIQPCSEKKAENIDPKVISQTLTTNGYSVPTVSSGNLNVELPSDSKIPDTKDMQGIDISSRIETIDKKPDPNNSMTYLSSSPCPSTGLLGENSSLLINSKVMTGKEISESKSLPKLCEQAKCENLQSSQDIQVEQIMSQDNAEVSSDKHIESNIMNNKQKEFHGGENLTYDIKRDDQNAALANFVGTSGTNIESRQYSALSSDSSPAVEWIGDVSMWEDCKTGLKWVKVTKCYFPDDLPGNIGHPCISEVNEVYESNSDRTEMASSIQGPCEVLPSDKFKQENDRRCQLGIEERSRVRPIFLCRWFYDEFKKLFQPVFGGFRTGFFMYGWIIEHVFMVEPS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00379 834 ProSiteProfiles BAH domain profile. 683 811 IPR001025 GO:0003682
Pste8g00379 834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 404 476 IPR013083 -
Pste8g00379 834 SMART PHD_3 414 463 IPR001965 -
Pste8g00379 834 Pfam PHD-finger 415 463 IPR019787 -
Pste8g00379 834 Gene3D - 680 813 IPR043151 -
Pste8g00379 834 SUPERFAMILY FYVE/PHD zinc finger 405 470 IPR011011 -
Pste8g00379 834 ProSitePatterns Zinc finger PHD-type signature. 415 462 IPR019786 -
Pste8g00379 834 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 9 707 - -
Pste8g00379 834 ProSiteProfiles Zinc finger PHD-type profile. 412 465 IPR019787 -
Pste8g00379 834 CDD BAH 693 806 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste8g00379 PHD 8e-08 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00379 8 1966952 1974112 Pste8g00379 8 1966952 1974112 ECH