Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00371 TTGTCTTCAAACTAGAGTGGATGTAACAGTGTCTGAAAAATTCAAAGGCTCCAAACTAGAGAAAGAAATATCATTCTGTGCCACAAAGTCTTCTTTTTTATAATAAATTTTCATTTTTTTATAATTACAATAGCAGGGGTTGCAGATTTGTACCTGCTTCTGTACTTTTTTCTTCATTCTCTTTACATCGTGTTTCTGTACACAGAATTATGAGTTGTGAACTCTTATTATTCATTTATTGTTCATATTATCATCTGGGTCTTCCTTGATCATTGACTCTCCGTTGGCCTTTGACTGTTGCTTCTTTCTGTTTCTTTAACTGTTGATTAATCTTGATGTTCATTTTTTCTTTTGCTCATTTCTTAGCAGAATTAAGGCTGAACGAATTTCCACTTTTTTCTTGTGATTAATCATCTTTCCATTTTAAGATACTAGTTCTTCTTTGTTCAGCTTTCGTTAGGGATAGCTGGAATTTTGTTTCCTCTGTTTCTTCATGTTTGATTCTGTCGAAAATTTTTTATTTCTTCTTGTGTGGCATGATTTTTGATCATTCTGTATTCATTATCAGTTTTTTTTTTAACCCTGTCACTGAGTAAAGGAAAAAAACAGAAGAAGCAAGTAAGAGTTTAGTCTGTCTAGATTATTTTTTCTGTGACCTGAGTTTTTTTTTTTCATAGTTCCATGCTTAAAAATTATTCCCTCATCATTCTCTTTCTTCTTCTTTTTCTTTTCTTTTCTTTATCTTTCTTTTGAAGTATTATTGCCATCTACTTGAATTGAAAAACTTATGCTTCACTGTTTTCCCCATTTAAATGTGTCTTGCAGTTGAGATTTCTTTTACTCTTTCTACTTTCCTTTTGGAAACAGCATATTCTTAAATTTTAATGCGCACATCATGATATTTTTTGTTCGTTCATACAACATTTGAAATTGCGTGACATATTTGTAAGAGTTACTATAAAATGATATTTTCAATTATCTATTTTGGTGTAATTTTCTTTAATTTTTCATGCTTGAAGAAATAGAACTAATACATATTTGTTTTCTTCATATAGGAATGGGAACAAATCTCAGCACTCCCAAAACTGAAAAGTCTTCCGATGATGGTGAAAATGACCATCTTAGATATGGTTTATCATCTATGCAGGGCTGGCGTGCAGCAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCCACTTCCTTTTTCGGAGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAATATCTTCACCAGCAAGTGCTCAAGAACGAAGCATACCTAGCCGGAGATATAGGAACCTCTCTTCAAGAATCATTTTTCAGAATGGACCAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCATCTTTGGGTGATAAGATAAACAAGTTTAATGGAAAGATAGAAGGATTGATTTGGTCTCCACGAAGCAGAGATTGTAAGGACCAAAATGGTGATTGGGCCTTTGAGGAGGGTCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAATTATTAGAAACAACCAAATTTTTGTAGCAAATGCTGGTGATTCACGTTGTGTATTATGTAGGAAGGGTCAGGCGTATGATTTGTCTATAGATCATAAACCTGATCTTGAGATAGAGAAGGAAAGAATCATAAAAGCTGGTGGTTTCGTACATGGAGGACGAGTAAATGGGACTTTAAGCCTTGCAAGAGCTATAGGTGACATGGAATTTAAGCAGAATAGATTCCTTTCTGCTGAAAAACAAATGGTGACAGCCAATCCTGATATAAATACTACTGAACTTTGTGATGAAGATGAATTTATAGTGCTAGCTTGTGATGGCATATGGGATTGCCTATCAAGCCAACAATTGGTAGATTTTGTGCGTCAACAACTGCTCTTGGAAACTAAACTTTCTGCTGTTTGTGAAAGAGTATTAGATCGATGTTTGGCACCAACAATTACTGTTGGTGATGGATGTGATAACATGACCATGATTTTGGTGCAATTAAAAAAATTGGTCCAACCAAGCGCACCTGTATTTGAGCTTTTCTCTTCAAATGAACAAGCTACATCTGAATTATAACACTAGAGAGCAGTGAAAGTAAGTTTTCGACAGCAACACTACTCACATGTATTGTATAGTGTGGACCACTGCTTTCTGCTTAGAATGGGTCTAGATGTTCATTTTCACTTCAACAAGCATTTATTTCCAAATTTTTGTGTTTACTTTCACACCTAGAGTTTGTTTTACTTGTTCAATAAGCGGCTCCAGATATTAGTATCTATAGCTATTAGCAACAATCTGCAGGCATTATGTGATGTTTAGCTAGTTGTTGTAAACTGCAAGGATTTAGGTCCCAACTTAGAATATTGTATATGTATATATGATATGGCATATATCATTAAATGGCCTTGTTATGTGAGGATCATACAGGTGAGGCTGAAATTTGATCTTTTATGGATTCTTTGACCATCAAGAGAGGGGGTTTGCATGAGTAAAAAATAATAAAAATGTATTTG 2556 0.349 MLEEIELIHICFLHIGMGTNLSTPKTEKSSDDGENDHLRYGLSSMQGWRAAMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYLAGDIGTSLQESFFRMDQMMRGQRGWRELASLGDKINKFNGKIEGLIWSPRSRDCKDQNGDWAFEEGPHSNFAGPTSGSTACVAIIRNNQIFVANAGDSRCVLCRKGQAYDLSIDHKPDLEIEKERIIKAGGFVHGGRVNGTLSLARAIGDMEFKQNRFLSAEKQMVTANPDINTTELCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLLETKLSAVCERVLDRCLAPTITVGDGCDNMTMILVQLKKLVQPSAPVFELFSSNEQATSEL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00371 369 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Pste8g00371 369 SMART PP2C_4 29 343 IPR001932 -
Pste8g00371 369 ProSiteProfiles PPM-type phosphatase domain profile. 39 345 IPR001932 -
Pste8g00371 369 CDD PP2Cc 39 345 IPR001932 -
Pste8g00371 369 SUPERFAMILY PP2C-like 20 346 IPR036457 -
Pste8g00371 369 SMART PP2C_SIG_2 44 345 IPR001932 -
Pste8g00371 369 Gene3D - 16 346 IPR036457 -
Pste8g00371 369 Pfam Protein phosphatase 2C 171 328 IPR001932 -
Pste8g00371 369 Pfam Protein phosphatase 2C 39 119 IPR001932 -
Pste8g00371 369 PANTHER PROTEIN PHOSPHATASE 2C 32 344 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00371 Pste-Chr8 1934867 1942467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00371 17 347 PP2C-type Phosphatase Gene Family AT2G25070 74.320 0.0 540