Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00350 ATGCATATTTCCAGTTACCTTAATGAACCTCGTCTTGTTGCCAGAAAGTTCTTGGCCCGACCTCAACATGAGGGTCTTGGGGCAGTTGTTAGGAGAAGCATAGGGAGATTTGAACTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTCACTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGAGCTGTAATGCATGAAGACTTTGAAGGACATAAGGGAACAATTGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGAATAGTTCACTCAGAAATGCCTGCAGCTCAAGGGACTCAAAAGGGTCTCCAGCTGTGGATCAACCTCTCTTCAAAACATAAAATGATTGAGCCAAGGTACCAAGAAATGTTGAGCAAGGACATAGCTGAAACTATGATAGATGGTATCAAAGTTAGAGTTATAGCAGGGGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGATTTTTCTCTTAAACCTGGGGCACACTTACAACAACTTATACCAAAATCTTGGAATGCTTTTGTGTACATATTGGAAGGAGAGGGTATCTTTGGAAACCAAAAATCTCAGCCTGTCATCTCTCACCATATACTTCTTCTTGGTCCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAGCTCCTTAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCTTTTGTAATGAACACCCAAGAGGAGATTGACCAGACAATTGATGATTTTGAAAACTACACCAACGGATTTGAGAAAGCAAGACATTGGAGGTCTGAAAGTGCAATTAATCTTGATTATTGATTTTATTTCGTGTAACATTTGTTGGTTGGTTGGTTTGGGTAACATGGCAGGAAAAAAATAAGTTCTCATGTAAATTGGAATCTATGAATTAGGCCAAGAATTTCTATCCTTTTTACCTTTATAATGTCAACATTAATTGTACTCGTAAATTAAAATCCACAAGTAGCAAGTTAAAACCAGA 1078 0.4045 MHISSYLNEPRLVARKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVMHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKHKMIEPRYQEMLSKDIAETMIDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQLIPKSWNAFVYILEGEGIFGNQKSQPVISHHILLLGPGDGLEAWNKSSKLLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWRSESAINLDY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00350 298 FunFam pirin 24 162 - -
Pste8g00350 298 Pfam Pirin C-terminal cupin domain 176 280 IPR008778 -
Pste8g00350 298 Gene3D Jelly Rolls 145 250 IPR014710 -
Pste8g00350 298 SUPERFAMILY RmlC-like cupins 11 290 IPR011051 -
Pste8g00350 298 PIRSF Pirin 9 289 IPR012093 -
Pste8g00350 298 CDD cupin_pirin_C 173 249 - -
Pste8g00350 298 Gene3D Jelly Rolls 24 276 IPR014710 -
Pste8g00350 298 CDD cupin_pirin_N 28 125 - -
Pste8g00350 298 PANTHER PIRIN-RELATED 7 292 IPR012093 -
Pste8g00350 298 Pfam Pirin 30 123 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00350 Pste-Chr8 1868029 1870939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00350 10 286 Calmodulin-binding Proteins AT3G59220 59.140 3.80e-126 359
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00350 8 1868029 1870939 Pste8g00350 8 1868029 1870939 ECH
Pste7g01380 7 12500230 12503846 Pste8g00350 8 1868029 1870939 PCT