Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00345 CCGAAACTCTCATTTTTTCTCTGCTTTTCTCTCTCTGTGTACATTGCTTTCTAAGTTGTAAACACTGCTCGGAAAAACCATAAGCATGAGGCGAAGCAGTAACGCAGAGACTCGTTCCTCTGCCACCATTTCATCCTCATCTCTCAGAAACTTTCTTCCCAGATCACTATCTTCCAGTTCCAAGCACAAAGCCACTTTAAACCCTAAAATCCAAAATTCAGATGCAGAGAACACTCCCCCCACCCATCCCAACAGCCTTATCGACCATCAACAATCGTTGCCTTCCACCGCCAAGCAATCACCCTCCAAAACATCAATTTCTCAGAACAACCTCAACCAATCGAAACACCCTCTTGAATCCGACCCATCAGTGAAGGTTGTAGTACGAATCAGACCTACCAATAACAATGGGATAGAGGGAGATCGAACTATTAAGAAGGTTTCTTCTGACGCCTTATGTGTTGCGGATAGGCAATTTACATTTGATTCAGTTTTTGATTCGAACACCAATCAGGAAGATATTTTTCAGTCAGTGGGTGTCCCCTTGGTTAAAAATGCTTTAGCTGGTTACAACACTGCAATTCTGACCTATGGACAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCCCCAAGTGCCATGTTTGAGGAGCCCTCGCCCCAAAGTCACAAGGGAATTGTTCCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGAGAGAGAGCAGCATGTGTCTGATGGGAAACAGTTCAACTATCAATGTCGTTGTTCTTTTCTTGAGGTGAAAGATGATTCCAAAAATGCATTGTATATAGAGAATCTGACTGAGGAATATGTCACTAGCTATGATGATGGCCTTTCAAGCAGAAAAGTCGGAGCAACAAGCTTAAATTCTAAGAGCTCTAGATCACACGTAATTTTCACTTTTGTGATTGAATCTTGGTGTAAGGGAATATCATCAAATAGTTTCAGTAGTTCAAAATCTAGCAGAATTAGCCTTATTGATCTTGCTGGACCGGACAGGAACAAAGTTGAGGATGCAGGCAAGCAATGTCTAAAGGAAAGCAAAAATGTAAAGAAGTCCTTATCTCAGCTTGGGCACTTAGTAGATGTCCTGACTAAAGAAACTCACTCAAGGAAACCAGAAGAAATTTCAAACAGGAAGTTCTGTTTAACACGTTTACTACAAGAATCACTTGGTGGAAATGCCAAACTCTCAGTAATCTGTTCCATCTCCCCTAATAACAAGAATAATGGTGAAACGCTGCGCACACTCAGGTTCGGACAGCGAGTCAGAACCATTAGAAATGAACCTGTTATCAATGAAATCAAGGAGGATGATGTTAATGATTTAAGTGATCAAATCCGGCAACTGAAGGAAGAACTTATTAGAGCAAAGGCAGATGTTCTTCGCAGCTCAGATGGGACTAAAAACGGATACTTCCAAGGACGTAATGTACGAGACAGCCTTAATCAGTTGCGAGTAAGCTTAAATCGCTCTCTACTCCTACCTGGCATTGATAATGACACTGATGAAGAGGTAAATGTGGACGAGGAAGACATAAGGCAATTACGCCAGCAAATTGATGAATTGTATCATTCGTGTGAAGGGAATCCTAAAAACATATCAGTCAGTGAAGATTGTGTCCAGTATTACTCTGTTGTGGAAAATTGTGATGCAGATATGACCAGTGGTGATGAAATTGAAAAAGAGGAAGTATGTTTTAGAGAAACCTTGAGTAATCTTTGTCCTGAGGAAAGTGAGGGATCCACTACCACCTTGTATGCATCTGCAGATGACTTTGCATGCTCGGCTAATGCCTCAAGGACAATTAAATCCACATTCAGAGATAGTATTTCAGTTAGTTCATGTAGTCAATCTCAAATTCTCGAGGAACCACAGTTGTCTGAGTCTCCAAAAATCAGGAATGTCCAGAGGAAAAGTGTGGCTTATTCACCAAGTTGTCTTGGAAGTTGGAACAACATAGCAGAGGACAATTTGAGAACCAGTGATGGTATAGGACAGTCATTTAAAGAGGGTGAGCAGATGCGATGCTCACTACGATCAAGCAATATTTTTCCAGGCCCGACCGAATCCTTGGCTGCAAGCCTTCAAAGGGGATTGCAAATAATTGATTATCACCAGAGAAACTTAGCATTAAACAAATCTTCAGTTTCCTTTTCTTTTGAGCATTTAACCTTGACACCTTGTCCAGAAATAAACAAGGGTGATTCATGTGATAGAATAATGCAACAGAAGAAATATTGCGTTGATGAAAGAACTGCTACTTTGATTTGTGAATCTTGCCGTAAAAAAATATGTGGTCCCGATTCTAGTGAGTTCCAAGATAGCTTAAAGTCATGCACTGAAACAGCTGAAGCAGGAAATCCGGATGACCTGACAGATAAGCTTTCAAAAGAGCTAGAGAAAAAGATCATGAGAGAAAAGGAGCTAGAGAATGTTTGCAAGGAGCAAGCTGCTAGAATTGAAGAACTAAATCAATTGGTGGAAAAATTGAAAGGAGAGAAAGAACTAAAATCCTCCATCATTGTCTATGGTCAAGAAGGAGGCAACAAACATAGTAACCACGAAGAAGAGTATATCTCATTGAAAGATGAAGACAAGCTTCTTAGGGGCAATTCCTCAGACAGGCGTTTACCAGATATTATAGAGGAAAATTGTGAAATTAAAGAAGTTCAGGAAGAAGTAACTCAAAGAGACAGCTCTTTTGATGCAGCCGAGAAGGAAGAACTTCTTAAGGAAATTCAAAATCTAAGAAGCAAGCTGAATTTATATAGCGATGCACCAGTTAAAAAGTCCACCGACAAACTGAGATCTTCCTTATCATTAATGTCAAGGTCCATTCAACTGCGAAAAAGTGTATTTTCTAATGATAATGATAGAGATGAACTAGAGCAAGAGAGACAGAAATGGACAGAAATGGAAAGTGAGTGGATTTGTTTGACTGATGAACTAAGAGTTGATCTTGAGTCTAACCGTCAGCGGGCAGAGAGGGTGGAGATGGAACTGGGTTTAGAGAAGAAGTGCACTGAAGAGTTAGATGATGCACTAAAAAGAGCAGTTCTTGGACATGCCAGAATGGTGGAACACTACGCTGACCTCCAAGAAAAATATAATGATTTGGTAGCAAAACACAATGCTATAATGGAAGGCATAGCAGAGGTGAAGAAGGCAGCAGTGAAGGCAGGAAAAAAGGGGCATGCTCGCTTTGCCAAATCTCTTGCTGCTGAGCTTTCTGCATTGAGGGTGGAGAGAGAAAGGGAAGCAAAATTCTTGAAAAAGGAGAACATGAATCTGAAGATTCAACTAAGAGAAACTGCAGAAGCTGTTCATGCTGCTGGAGAACTACTTGTCAGACTAAGAGAAGCCGAGCATGCAGCATCTGTTGCAGAGGAGAATTTCACAAAAGTGCAACAAGATAATGAAAAGCTAAAAAAGCAAATGGATAAGCTGAAAAGAAAACACAAGATGGAGATGATTACTATGAAGCAATACCTTGCCGAGAGCAAATTACCAGAGTCTGCACTGCATCCACTATTTAAGGAGGATTCTGATGTGATTCATAGTGGTGCAACTTCTCATCCGGATGACGATCAGGCTTGGAGAGTAGAGTTTGGAGCAATCTACCAACAGCATTATTAATTCGACATTTGTTGGATTAATGATGAGTCTGACAGCAGACAAGACCATAAAATGGAGATTCCAACAGTTTGTCTGACATCAGATCCTTCTCGGATCAAAAAGTATTCATACATCCATTTATATTCTTTCTATTGATTTCTTCATTTTATATTTTAACCTGTGTGGAACAACTTTGTTTATGGAAAACCAGTTCTTTACCGCTCGTTCGAATTTTGCTGGTGAGTAGAATGCTTAATAATATATTTGTTGGTGT 3920 0.4028 MRRSSNAETRSSATISSSSLRNFLPRSLSSSSKHKATLNPKIQNSDAENTPPTHPNSLIDHQQSLPSTAKQSPSKTSISQNNLNQSKHPLESDPSVKVVVRIRPTNNNGIEGDRTIKKVSSDALCVADRQFTFDSVFDSNTNQEDIFQSVGVPLVKNALAGYNTAILTYGQSGSGKTYTMWGPPSAMFEEPSPQSHKGIVPRIFQMLFSELEREQHVSDGKQFNYQCRCSFLEVKDDSKNALYIENLTEEYVTSYDDGLSSRKVGATSLNSKSSRSHVIFTFVIESWCKGISSNSFSSSKSSRISLIDLAGPDRNKVEDAGKQCLKESKNVKKSLSQLGHLVDVLTKETHSRKPEEISNRKFCLTRLLQESLGGNAKLSVICSISPNNKNNGETLRTLRFGQRVRTIRNEPVINEIKEDDVNDLSDQIRQLKEELIRAKADVLRSSDGTKNGYFQGRNVRDSLNQLRVSLNRSLLLPGIDNDTDEEVNVDEEDIRQLRQQIDELYHSCEGNPKNISVSEDCVQYYSVVENCDADMTSGDEIEKEEVCFRETLSNLCPEESEGSTTTLYASADDFACSANASRTIKSTFRDSISVSSCSQSQILEEPQLSESPKIRNVQRKSVAYSPSCLGSWNNIAEDNLRTSDGIGQSFKEGEQMRCSLRSSNIFPGPTESLAASLQRGLQIIDYHQRNLALNKSSVSFSFEHLTLTPCPEINKGDSCDRIMQQKKYCVDERTATLICESCRKKICGPDSSEFQDSLKSCTETAEAGNPDDLTDKLSKELEKKIMREKELENVCKEQAARIEELNQLVEKLKGEKELKSSIIVYGQEGGNKHSNHEEEYISLKDEDKLLRGNSSDRRLPDIIEENCEIKEVQEEVTQRDSSFDAAEKEELLKEIQNLRSKLNLYSDAPVKKSTDKLRSSLSLMSRSIQLRKSVFSNDNDRDELEQERQKWTEMESEWICLTDELRVDLESNRQRAERVEMELGLEKKCTEELDDALKRAVLGHARMVEHYADLQEKYNDLVAKHNAIMEGIAEVKKAAVKAGKKGHARFAKSLAAELSALRVEREREAKFLKKENMNLKIQLRETAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKLKKQMDKLKRKHKMEMITMKQYLAESKLPESALHPLFKEDSDVIHSGATSHPDDDQAWRVEFGAIYQQHY 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00345 1193 MobiDBLite consensus disorder prediction 7 91 - -
Pste8g00345 1193 Coils Coil 487 507 - -
Pste8g00345 1193 Coils Coil 414 441 - -
Pste8g00345 1193 ProSiteProfiles Kinesin motor domain profile. 95 407 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00345 1193 Coils Coil 788 822 - -
Pste8g00345 1193 PANTHER KINESIN-LIKE PROTEIN KIN-12D 18 454 IPR044986 -
Pste8g00345 1193 PRINTS Kinesin heavy chain signature 303 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00345 1193 PRINTS Kinesin heavy chain signature 161 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00345 1193 PRINTS Kinesin heavy chain signature 357 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00345 1193 PRINTS Kinesin heavy chain signature 267 284 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00345 1193 Coils Coil 1100 1141 - -
Pste8g00345 1193 Coils Coil 888 908 - -
Pste8g00345 1193 Gene3D Kinesin motor domain 91 446 IPR036961 -
Pste8g00345 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 439 IPR027417 -
Pste8g00345 1193 Coils Coil 1055 1089 - -
Pste8g00345 1193 MobiDBLite consensus disorder prediction 1 95 - -
Pste8g00345 1193 SMART kinesin_4 93 415 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00345 1193 Pfam Kinesin motor domain 115 407 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00345 1193 Coils Coil 937 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00345 Pste-Chr8 1846156 1852389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00345 96 411 Calmodulin-binding Proteins AT5G65930 33.048 2.83e-41 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01387 7 12558017 12564548 Pste8g00345 8 1846156 1852389 PCT