Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00336 ACATTTTATGCCTTTCTTCTTCAGCTATCTATTATCTTCCAATCCTTTTTTATAACCATTATTCATCTCACCATTTTATTCATTCTTTTTAATAATTTTATATTTTTTACTACATGTTATGTCAACATTCATGCAATACGTCACAATTAATTACTATAACTTGTTTTTTCCTCACTGTCGCTAGATTTTGGTCACGTTTTTTATCGCTAATTGTAATTTTTCTTCTAATACACCTCATCTTATACGCTAATTTCTCCTGTGTGAGATAACCGTTTGTTCTTCTGTTTTTTGTTTAATTCCGAGTTTATTTGTGTGTGTGTGTGTTTTATAATTTTCCATTTGAAAACTTTAATGGGGTTGTTTTATTCTTGTCTGTTTCCTTTTTCTCCCACAAAAAAATAGTGACATGGCGAATTTGGTTTGATATGATTTGATTTTGGCGAGTACTGATTGGTGTTGCATGTTTATGTTGTGATAGATGCTGAGTGTTAACCCTGACAAAGATTCTGAGCCATTTGCTGAGACCGATCCAACCGGTCGCTACGGTAGATACAGTGAGTTACTAGGGTGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAAGAAGAAGGAATAGAAGTGGCTTGGAACCAGGTGAAGTTGAGGAACTTTTGTGATGACCCTACCATGGTGGATAGGCTTTACTCTGAAGTGAGGTTACTCAGAAGCTTGACCAACAAAAGCATCATTGCCCTTTATAGCGTGTGGAGGGATGAGCAACGTAACACTTTGAATTTCATCACTGAAGTTTGTACCAGTGGGAATTTGAGAGAGTACAGGAAAAAACATAGGCATGTCTCCATGAAAGCCCTCAAGAAGTGGTCTAAGCAGATTTTGAAAGGGTTGAATTATCTGCACTTGCATGATCCCTGCATCATCCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAACCATTGTGCTCACACGATTCTTGGCACACCAGAATTCATGGCCCCAGAATTATACGATGAAGACTACACAGAATTGGTGGACATATACTCATTTGGGATGTGTGTGTTAGAGATGGTGACACTTGAGATTCCTTATAGTGAATGTGACAATGTTGCTAAGATATACAAGAAGGTGACTTCTGGAGTTAGACCTGCGGCTTTGAACAAGGTCAAAGATCCAGAGGTGAAGGCATTCATTGAGAAATGCCTTGCTCAGCCGAGGGCAAGGCCTTCTGCAGCTGAACTTCTCAGAGACCCTTTCTTTGATGAAATTGTTGATGATGACGAAAATGATGACTATCAAAGAAAAAGTGAAGTCAAAGGTTTGAACTTTGAACGCAATTTCAGCGACATGAGCCTTATTAGTACCAAACGAAGAATTCTAAGAAGAGAGGTGTCCTTATCCAATGTTCAAATAGAGAACACAAGATTCATTCGCACCACCCTTAACAACAGAGAATGTACAAGAGGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCCTAGGGGCACTTGATCCCAAAAACGTGCTTAACATTGGGTCGCCAAGACCATCACATCCATGCTTGGTCAAGTTAAATGGTGTAAGATGTAGCTCAAATGCAACCAATATTGTACATATAAGGTTTGAGAACTTGAACCTTAGTGGCACAATCGATGCTGATTCCCTATGCAGGCTCCAAAAGTTGAGAGTGGTGAGCTTGGCTAAGAACAATATCAGAGGACCTATCCCTCATTCTATTTGGCATTGTACAAGGTTGACCCATTTGAATGTGACCAGCAACCAATTGAGTGGGAGGTTGCCAAATGCCTTAACAAAATTGAAACATCTTAGGAACTTAGACATCTCTAATAACAACTTTTCTGGTATGATCCCAAGTAAGCATCAATATAGGCGCTTGATTACTTATTATGTGGCTCCTAGTAATAAGATAGAAAGCAGTAGTATCAACGTGGGGCTAAAGGAAAGTGACACAAACACAACACCACCAACATTAGAATCAGATCCTTCAAGTGACACCAAATCTGTTAAAGGCAGGAAACCATGGTATTCGAAATATGCACTCTTTATGGTGTTACTTTTGGGCACTGGAGTGCTTTTGTCATCCGTTTACTTTATGATAAAGAAGGTAGCAATGTTAAGTGCAGTGAGAAAGGAAGTTGAAGGAGATCATGGTGTACATCCAATAAAAAAGGTTACAACTCATGAAGTTCAAGAGGTGAAGCTAAAGGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGACCGTGAAAGGTTCACACTGGAGGACCTTCTTCGAGCCACTGCAGACTTGAGGAGTGAAGGCTTTTGCAGCAGCCTTTACCAGGTGAAATTGGAGAACCATGTTCACTATGCAGTCAAAAGATTGAAGAATTTGCAGGTATCCTTGGAAGAATTTGGTAAAACATTAAGGAAAATTAGTAACTTGAAGCATCAAAATATCCTCCCCCTTGTTGGTTACCGCTCTACCGGTGAAGAAAAACTCATCATTTACAAATATCAAAGCAATGGAAGCCTGCTTAATCTGTTAAACGCATGTGGGATTGCAAGGGGCTTGGCCTTCATACATAGGAAGATGGATGGAGAGGAGGTTATTCCTCATGGGAATCTTAAGCCATCGAACATCCTTCTTGATGAGAACAATGAACCACTAATAAGTGAGCATGGTTTATCAAAATTCTTGGACCCAAATAAAGGATTCCTCGTTTCCTCTCTGGGATACACAGCACCTGAAAAGAGGCTAACAGAAAAGGGTGACGTGTACAGCTTTGGGGTGATTCTCTTGGAACTACTAACAGGAAAAAGCACAGAAGTCAGTAGAATAGACCTTGCTAGATGGGTGAGGTCCATGGTGAGAGAGGAGTGGACTGGAGAGGTGTTTGACAAACAAGTTAGGGAAAATGAGCATCAGTGGGCATTTCCTCTGCTGAATATAGCCCTATTGTGTGTGTCACGTTTTCAAGAAAATAGGCCAACCACTGTGGAGATTCTGGACAAGATAGAGGAGGTCATAGATCAACATGAACAACATCAGGAAAGTTGTGCTACCAAATGCTGTTCCAATGGATCCAACCGTGATCAATGTTGTTCACTTCACAAAATCATACCTGAAACATGGGATTCTCCAGGATCAAATTATTGA 3223 0.4015 MLSVNPDKDSEPFAETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPTMVDRLYSEVRLLRSLTNKSIIALYSVWRDEQRNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVTSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAAELLRDPFFDEIVDDDENDDYQRKSEVKGLNFERNFSDMSLISTKRRILRREVSLSNVQIENTRFIRTTLNNRECTRGELSESESFFNFLGALDPKNVLNIGSPRPSHPCLVKLNGVRCSSNATNIVHIRFENLNLSGTIDADSLCRLQKLRVVSLAKNNIRGPIPHSIWHCTRLTHLNVTSNQLSGRLPNALTKLKHLRNLDISNNNFSGMIPSKHQYRRLITYYVAPSNKIESSSINVGLKESDTNTTPPTLESDPSSDTKSVKGRKPWYSKYALFMVLLLGTGVLLSSVYFMIKKVAMLSAVRKEVEGDHGVHPIKKVTTHEVQEVKLKEGDSELVFFVEDRERFTLEDLLRATADLRSEGFCSSLYQVKLENHVHYAVKRLKNLQVSLEEFGKTLRKISNLKHQNILPLVGYRSTGEEKLIIYKYQSNGSLLNLLNACGIARGLAFIHRKMDGEEVIPHGNLKPSNILLDENNEPLISEHGLSKFLDPNKGFLVSSLGYTAPEKRLTEKGDVYSFGVILLELLTGKSTEVSRIDLARWVRSMVREEWTGEVFDKQVRENEHQWAFPLLNIALLCVSRFQENRPTTVEILDKIEEVIDQHEQHQESCATKCCSNGSNRDQCCSLHKIIPETWDSPGSNY 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00336 914 FunFam Leucine-rich repeat receptor protein kinase EMS1 414 508 - -
Pste8g00336 914 MobiDBLite consensus disorder prediction 510 539 - -
Pste8g00336 914 Pfam Protein kinase domain 636 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00336 914 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00336 914 ProSiteProfiles Protein kinase domain profile. 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00336 914 Gene3D Transferase(Phosphotransferase) domain 1 106 287 - -
Pste8g00336 914 Gene3D Transferase(Phosphotransferase) domain 1 703 894 - -
Pste8g00336 914 Gene3D Phosphorylase Kinase; domain 1 591 701 - -
Pste8g00336 914 MobiDBLite consensus disorder prediction 510 532 - -
Pste8g00336 914 SUPERFAMILY Protein kinase-like (PK-like) 616 871 IPR011009 -
Pste8g00336 914 SUPERFAMILY Protein kinase-like (PK-like) 25 305 IPR011009 -
Pste8g00336 914 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 323 - -
Pste8g00336 914 SUPERFAMILY L domain-like 376 508 - -
Pste8g00336 914 CDD STKc_WNK 21 281 - -
Pste8g00336 914 Gene3D Phosphorylase Kinase; domain 1 7 104 - -
Pste8g00336 914 FunFam Probable serine/threonine-protein kinase WNK1 7 104 - -
Pste8g00336 914 FunFam probable serine/threonine-protein kinase WNK9 106 287 - -
Pste8g00336 914 Pfam Leucine rich repeat 422 481 IPR001611 GO:0005515
Pste8g00336 914 ProSiteProfiles Protein kinase domain profile. 627 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00336 914 Gene3D Ribonuclease Inhibitor 356 520 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00336 Pste-Chr8 1804345 1815648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00336 7 285 MAP Kinase Kinase Kinase AT5G55560 83.513 2.43e-174 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pste8g00336 Pkinase 4e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00336 8 1804345 1815648 Pste8g00336 8 1804345 1815648 ECH
Pste7g01393 7 12677831 12679590 Pste8g00336 8 1804345 1815648 PCT