Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00334 TTTGAATATGACACATTATGCAACTGTTGATTGAGGTTGGATTCACACCACCCACTTTCTATTCCCCTCCTATGATAAACTCTTTTCCTTTTTTGATTGAAAGCTAAGTTTTCATTCTTTCTTTCTTTCTCTCTCTCTTTCCATTAGATAGATATAGTGTGCATGTGAAGACAAGGACATTTCCCAGAAAAAAAAAAAGTGTTTCTTAAAGACCCAGCAAAAATCTATGCCTCTGATTCCTGAATACACACTCCCTTCAATGCCAACACCAACACCAACACTGTCTTCACGATTACGATTGTAATTTGGTGGGGGATCTTAAAAGTTTAAGCTTGGATGCAATGTGGGTTGAATTAGGGCAGTTATAAGTGTCCTACATGTCAGGGTGACCCTCTTGGATCTTCTGCACAATGGCATTGTTCCGCAAGTTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTCGATTACTGCTTTACCACAGATGTTATGGAAGATGAAGAATATAGAGAGTATATAGCGGGAATAATTGGGCAACTTCGCGGCCACTTCCCCGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGAGATAGCCAAAGCCAAATTTCAAATATTTTGTGTGACTATGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGTTGCCCCTTACTTACCATGGAAATGGTCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCATTGTGAGCGAGGTGGGTGGCCATTATTAGCATTTATGCTGGCTGCACTATTAATTTATAGAAAGATGTTTACAGGCGAACAGAAAACACTAGATATGATATACAAGCAAGCTCCTCGAGAACTTTTGCAGTTGATGTCACCATTGAACCCATTACCTTCACAATTGAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACTCTGGACTGTGTAATTATAAGACTCATTCCTAATATGGGCGGAGAGGGTGGTTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATACCTGCAGATCGAACTCCCAAAGTTCTTTTTTCAACTCCAAAAAAGAGCAAACTTGTACGCTATTACAAGCAGGTGAGTGATTGTGAACTGGTTAAGATTGATATCCATTGTCATGTTCAAGGTGATGTTGTTTTTGAGTGTATTCATCTGGGCAGTGATTTAGAGTGTGAAGAGATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGAGATGAAATTGACATATTATGGAATGCTAAAGATTACTTCCCTAAAAATTTCAGAGTGGAGGTTCTTTTCTCAGACATGGATGCTTCGACTTCTGTTATTTCAATTGATCTGCCCCTTGTTGAGGAGAAAGAAGGCCTACCTGTCGAAGCATTTGCCAAGGTCAAGGAAATTTTCAGCAATGTGGACTGGCTAGATTCAAAGGAAGAGGTAGCAAGTGTGCTCCAACAAATCACAGCATCAAATATCTTTCTGGAAAGATTGGACAATGGGGGTTCTGCTGCAAAAAGTGGCATGCAAAAGGAATCATCTGGAAAATTTACACTCAATTCAAAGGCACACAATGATACAAAGAATCTGATTTCTGCAGTTCAGGAGAAACTTTCTATGTCCTCCTCGGGATCATCTGTAGATCTTCCTACGGAAAATAAGATAGAACCATTACCAAAGGCATTGTCAGAAAATAACATTGAGAGTCTTGAATGCTTAGGTCAGGGGAACCTATCTATTCCCTCATTTGAGCTCTCAACAGATTCAGATTCAATTGAAAAGGAGACTGAACCCTTAGAAACAAAACAATCATTGGAAAATGATACCAAGTTTACATCTGTGGCTCATGAGAATCAATCTATCCCCTTAATTGAATCATCAATGAGTGCAAATTTAATAAAAAGGGAGAGTGGGTCATTAGAATCCAAGGAGAAGGATATTGAATCATTAGCATCGAAGGCTCTTTTGAAAATGACACAATGTGGGAAACAATCAGTTCCCTTAATTGAACCATCTACTCATGCAGATTCATTGGAAAAGAAGACTGATCTGTTAGGATCAAAGGAGGAAGCAGTTGAATCACTAAAGTCGGAAGCATTGTTGGAAAATGATAACAGATTGAAATTTGAGCCTAAGCCACTTCCACAAATTGATACCAAAAGTTCTACTACTTCTGAAGTTGAAGGGGAACTTTGTATGTCCTCGTTCAAATCATCTGGTAATGCTCCTGTGGAAAATAACAAAGATACTCTAGAATTAAAGGCATTGCCAGAAGATAGCATCAAGACTCTTGCTTCCATAAGTCAGGGGAAACAGCTTATCCCCTCATTTGGACTCTCAAAAGATTCAATTTCTACGGAAATGCGGATTGAATCATTAGAATCAAAGGCCTCGGTGGAACATGATACCAAGGTTCCTACATCTATGGCTCATGGGGAGCAGTCTACACCCTTAATTGAACCATCCAAGGATGCAAATTCAATTAATCAGAATATTGGACTGTTAGAGTCAAAGGAAAAGGATACTGAATCATTAGAATCAAAGTCATTGTTGGAAAAAGATACCAACTATACTCCAACTATGGCTCAGGGGAAGCAAGCTTTACCCTTAATCAAACCATCGACAGATGCAAATTCAGCAAAAAAGATGGAACAATTAGAACAAATGGTATTGCCAGAAAATGATGTCAAGAGTGTCACATCCACAGTTCAAAGGAAACAATGTAGTCCCTTACTTGAACTGCCTGTTGATGCAAACCTAATTAAAAAGAAGATTGAACCTCAAGAATTGCAGGTTGCACTTCAGCTTCCCACTCAATCTAAAATCATTTCACCACTGGTGCGTCCAGCAGTTCGATCTGCTTCTGCTTCTTATTTTAACTCCTTTCAAGGTTCCCCTGTTGCTATCTCAAGATATCATAGTGCACCATCAGCTCTTGGAATAACATCTGTGTTGCAGGATCATGCATCAATGGATATCAAAGAAACCACCCATGCAGTGACAGTGCCTCCACCGACTTCTACTTTGACTCCTTCAGACTCCAAGGTTCCAAATTCTATAGAGCCTAGTTCTACAATTGTTCCTCTGGCATCACCACCATCATTGCTTCAATCTTTACCATTAAAACCTTCAGTTGATGCTCTTACTGCCATGGAAAAGACTTTTGGATCCTTTGCTTCTGCAGCTGTTCCTCCTCCTCCACCACCACCACCACCTCCTCCTCCTCCTCAAAGTAAGCATACTTCAGAATTGATACAATCTAATGTTGCACAGTACCTTGAAAATACAATACACAATGAAGGTCAGAAATCATTGGTTAGTCCCCCTCCTCTCATTCCTCATCCTCCTCCACCTCCACCCCTTTCAATGCCAGCTTCTCCAACCCCTCCTCTTTCTTCTACATTCTCTGCCACACAGAGCTTGTCTTTATCCCATTCTCCACCCTCTTCCCTTCCTGGAAAAACATTACTTTCCACTGCCAAAGATTCATTTAAAGGTCCTCCTCCACCGCCGCCTCCACCTACACCTGTACAGGCTTCATCATCTTCAATACCTCCTCCTCCTCCACTTTCTGGACTTCCTTCTTCTGCTTCCCCTGTTTCTTCTTCATCAAGTATGAATAAGTCTGTTGCCATGCCTGGCCCTCCTCCCCCACCTCCACCTCCTAGCCATTCTGGTTCTACTCCATCGCCATTAGCGCCACCACCACCACCTCCTCCTGGTTCTCCATCTGTACCCCCCACCACCACCTTCCCTTTCTGCCAACAACTTGACAAAATCTGCAGTTCCTGGACCTCCTTCTTTGCCTGGGCACCTTCTGTTCCTGGACCACCTTCTGCTCCATTTGGTGCAAAGGGACGTGGCCTAATGCGAGCCAATCCAAAAGCTCAGCCTAGAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGCCATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGAGTTTGAGGAAATTAAATCGCCGTGCCTCGGGGCAAAAAGTGGACAAAGTTCAATTGATTGAGCTCAGGCGGGCATATAACTGTGAGATCATGCTCACAAAAGTCAAAATCCCTTTGCCTGATTTGATGAGTGCTGTGCTTGCAATGGATGATTCAGTATTGGATGTTGATCAAATTGAGAATCTCATAAAATTCTCTCCAACCAAAGAAGAGATGGAAACGCTCAAGAACTACACTGGGGATAAGGAGAACTTGGGAAAATGTGAACAATTCTTCTTGGAATTAATGAAAGTGCCAAGAGTGGAAAACAAGCTCAGAGTTTTCAATTTTAAGATGCAATTCTTAGCCCAGGTTTCAGAGCTTAAAAGGGACTTGAATATTGTAAATAATGCATCTGAAGAGATAAAGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCGTTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCAGCTGTTGGGTTTCGGTTAGATAGTCTCCTTAAACTCACTGATACACGAGCCAGAAACAACAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTTGCTGAAAAACTTCCAGAACTTCTAGATTTCCCTAAAGACCTTGGGAGTTTGGAGGCTGCAACAAAGATACAACTGAAGTTTTTGGCTGAGGAAATGCAAGCTATTAGTAAAGGGCTGGAGAAAGTAGTTCAGGAGTTAACTGCATCTGAGAATGATGGACCCGTTTCAGAAACCTTCTGCCAGATTCTGAAGGAATTTCTTTCGTATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTAGCTTTATACTTTGGCGAAGATCCAGCACGTTGCCCATTTGAACAAGTTGTATCCACTCTGCTCAACTTTGTGAGAATGTTCATAAAAGCGCGAGAAGAAAATATCAAGCAGATTGAATTAGAAAAAAAGAAAGCAGAAAAGGAAGCAGAAAATGAGAAGTTGAAGCTAGCTGCTGCCAAAAAGGAGTCTGAACAGATGATGAGAACCACTATAAAGAGCGGGGATATTAAATGATATCTTTTTAAGGCCTCAAAACAAGAGTTGTTCCACAATGGAAAAAGTTGCTCTCTGGCTGGATGAAGAAAACCCCTTGCCCAAGTGCAAAACTATCTTGTTCTTGGCCTACAGGCATAGTCATGAGCTTAGAACTAACATTCATTTCATTCCCAAATTGTTCCATGTCCAGCAGAAAAGCAGTTTTATGCTGTTAACGTCAGTGAGAAGTGGTGAACTATTTCAGTGTACAAAGGATTTTTAGTTTTGCTCTCACATTAGCTATGTAAATGTTTATCCAGTGATGTATATTTTTCCCACATAAGATAGAATAGTGTCTTAAGTTTTACTTTAACTTGAGAGTGCTTAGAGGCACCCATACTTCATATTGAGAGTTTCATTCTAAGCCCTTATATGCTCTACATTCACTGATAAAGGCAAATGCTTTTGTAAATATTGAACTACTGATTATAATACATGTTATTT 5696 0.4071 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEDEEYREYIAGIIGQLRGHFPDASFMVFNMREGDSQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMVHHFLRSGENWLQLGQQNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKKSKLVRYYKQVSDCELVKIDIHCHVQGDVVFECIHLGSDLECEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDYFPKNFRVEVLFSDMDASTSVISIDLPLVEEKEGLPVEAFAKVKEIFSNVDWLDSKEEVASVLQQITASNIFLERLDNGGSAAKSGMQKESSGKFTLNSKAHNDTKNLISAVQEKLSMSSSGSSVDLPTENKIEPLPKALSENNIESLECLGQGNLSIPSFELSTDSDSIEKETEPLETKQSLENDTKFTSVAHENQSIPLIESSMSANLIKRESGSLESKEKDIESLASKALLKMTQCGKQSVPLIEPSTHADSLEKKTDLLGSKEEAVESLKSEALLENDNRLKFEPKPLPQIDTKSSTTSEVEGELCMSSFKSSGNAPVENNKDTLELKALPEDSIKTLASISQGKQLIPSFGLSKDSISTEMRIESLESKASVEHDTKVPTSMAHGEQSTPLIEPSKDANSINQNIGLLESKEKDTESLESKSLLEKDTNYTPTMAQGKQALPLIKPSTDANSAKKMEQLEQMVLPENDVKSVTSTVQRKQCSPLLELPVDANLIKKKIEPQELQVALQLPTQSKIISPLVRPAVRSASASYFNSFQGSPVAISRYHSAPSALGITSVLQDHASMDIKETTHAVTVPPPTSTLTPSDSKVPNSIEPSSTIVPLASPPSLLQSLPLKPSVDALTAMEKTFGSFASAAVPPPPPPPPPPPPPQSKHTSELIQSNVAQYLENTIHNEGQKSLVSPPPLIPHPPPPPPLSMPASPTPPLSSTFSATQSLSLSHSPPSSLPGKTLLSTAKDSFKGPPPPPPPPTPVQASSSSIPPPPPLSGLPSSASPVSSSSSMNKSVAMPGPPPPPPPPSHSGSTPSPLAPPPPPPPGSPSVPPTTTFPFCQQLDKICSSWTSFFAWAPSVPGPPSAPFGAKGRGLMRANPKAQPRRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELESLRKLNRRASGQKVDKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLAMDDSVLDVDQIENLIKFSPTKEEMETLKNYTGDKENLGKCEQFFLELMKVPRVENKLRVFNFKMQFLAQVSELKRDLNIVNNASEEIKNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLGSLEAATKIQLKFLAEEMQAISKGLEKVVQELTASENDGPVSETFCQILKEFLSYAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFIKAREENIKQIELEKKKAEKEAENEKLKLAAAKKESEQMMRTTIKSGDIK 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00334 1606 MobiDBLite consensus disorder prediction 710 727 - -
Pste8g00334 1606 SMART it6_source 1195 1604 IPR015425 -
Pste8g00334 1606 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Pste8g00334 1606 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Pste8g00334 1606 Coils Coil 580 600 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 1097 1112 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 1010 1029 - -
Pste8g00334 1606 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 339 IPR035892 -
Pste8g00334 1606 Gene3D Formin, FH2 domain 1214 1598 IPR042201 -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 1113 1149 - -
Pste8g00334 1606 SMART PTEN_C2_2 197 338 IPR014020 -
Pste8g00334 1606 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1208 1576 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 1587 1606 - -
Pste8g00334 1606 PANTHER FORMIN-J 643 1593 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 696 727 - -
Pste8g00334 1606 ProSiteProfiles C2 tensin-type domain profile. 199 339 IPR014020 -
Pste8g00334 1606 Pfam Formin Homology 2 Domain 1199 1556 IPR015425 -
Pste8g00334 1606 Coils Coil 1361 1381 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 1066 1096 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 1030 1059 - -
Pste8g00334 1606 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 902 926 - -
Pste8g00334 1606 Gene3D - 196 342 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 960 1153 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 963 981 - -
Pste8g00334 1606 Coils Coil 1557 1598 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 901 926 - -
Pste8g00334 1606 MobiDBLite consensus disorder prediction 982 1005 - -
Pste8g00334 1606 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1195 1582 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00334 Pste-Chr8 1796542 1812340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00334 819 892 FH2 protein (formin) Gene Family AT2G25050 45.333 8.27e-09 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00334 8 1796542 1812340 Pste8g00334 8 1796542 1812340 ECH