Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00333 CATGAATCTGTTCAAAGCAATTATTCTTGTTATGTATATTCCATCACTGTAGATTTTTTTCCAACACATGGGATTGAATTGAACAATTTACTCAGAACTAAGACCCTACTTTTGCCACCTATACACTAACTTTATTACAGAAAGTAATGGACCAATGACTAGCTAATACCCATATAAATAATTTATAGATTTTCTTTCTTTTCATTCACCCTTCTTCTCAACTACCCTTTTCAATATTCTATTGTAGTTTATCTGAATAAGGGCTCCTCCATTATATGCTAATTGTTTGCTTATCATGCTTTCAATTTGATGGTAGTTCAACTCTTCAACACAGCAATCATAATGGATGAAAAGGTGGAAACTCTTAAATCAGAGTTACAACGAGTGAGAGAGGAGAATAACACTCTAAGAGTGATGCTTGAAGTTCTAAGCACCAAGTACACAAAGCTTGAGACCCAACTTAAAGAGACAAACAAGGCACAACTCAAGGACATGAGTTCAAATCAAATAGGGTCTGTTATACCTATCGTTGAAGCAAACAAGAGACCGAGATTAGAGTTTCCCACAGCAAAAAAGCCATTACAAATCTTTGTCAGAACACACCCCAAGGATGATAGTTTGATAATAAAAGATGGTTATCAGTGGAGAAAGTATGGACAAAAGGTCACCAAAGACAATGCTTCACCTCGAGCTTACTTCAGGTGCTCTATGGCCCCCATTTGCCCAGCCAAAAAGAAGGTGCAAAGATGTTTACATGATAAGTCTATCATTGTTGCAACTTATGATGGAGAGCACAACCATGGTGCCCTTCATGAGTCATCTTCATCCACACCTACAGGATCATCTGTGGATAATAAGTTGCCTCTGACAAGAGTACCAAATGACAAAGAAGCTATGAACATTGACTTGGCTCTTTCTGGGTGGACTAAAACAGATAAAAAGCATTGTGAAGATGGCATCAACAACTTCAAAATTGAAGAATGTGTAAGTTCCCTAATCAAAGATCCTCACTTCACCATGTCATTAGCTGAAGCAGTTGCCCGCACCATCACTGGCCAGCAAAAGGAACAAGATCTAAACCTCAATTTGGATCTTCGAGGAGAGTGAAATCAATAATTTTTTTCCCTAATTCCACCTAAAGCCAAAATGCAAGTGTAAAGACAAATTTTAATTGCAAAAATTGTAGGACTGAAAAAAGTGAGGAAAACTTCTTAAGATATGTTTACTCTGAGATAATATATTCTATTTAGAGTCTCCATTTTCTCTTTTAATTACAACAATGTTATCTTATTTTCATTTTGTTTTGTTTTTTAAAATTTTGTGCATGAATAAAGTGAAAGCAAATTTGTATTTTTTTTCCTTTTCTATTTTCACTATTTCCTATACAAACTTTAGAAAAAAAATAATAAATAAAACTAAAAACCATTTTCCCA 1433 0.3475 MVVQLFNTAIIMDEKVETLKSELQRVREENNTLRVMLEVLSTKYTKLETQLKETNKAQLKDMSSNQIGSVIPIVEANKRPRLEFPTAKKPLQIFVRTHPKDDSLIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSIIVATYDGEHNHGALHESSSSTPTGSSVDNKLPLTRVPNDKEAMNIDLALSGWTKTDKKHCEDGINNFKIEECVSSLIKDPHFTMSLAEAVARTITGQQKEQDLNLNLDLRGE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00333 265 ProSiteProfiles WRKY domain profile. 101 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00333 265 SMART WRKY_cls 106 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g00333 265 SUPERFAMILY WRKY DNA-binding domain 102 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00333 265 Coils Coil 9 57 - -
Pste8g00333 265 Gene3D WRKY domain 92 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g00333 265 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 251 IPR044810 GO:0003700
Pste8g00333 265 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00333 Pste-Chr8 1793756 1796127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00333 13 255 WRKY Transcription Factor Family AT1G80840 34.859 2.96e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g00333 WRKY 2.6e-22 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00333 8 1793756 1796127 Pste2g01543 2 16459091 16460147 PCT