Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00329 ATGTCTTCTACGGATCTAAAGAAATCCAACAAGATCAGAGAAATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAAGTTAGCCAACACATCAAAAATCACCACCACCGGCGCTACCACCACCACTACGAGCAAGAGCATGAAGTTCTTGAAGAGAACACTTTCACTATCTGAACGTGAAGGAGGGTCCACAAGCAATGTTGTCCCCAAAGGGTACCTTGCTGTGTGTGTTGGTGAAGATCTTAAGAGGTTCACCATTCCAACTGAATATTTAGGGCACCAAGCCTTTCAGATTCTCTTGAGAGAAGCAGAACAGGAATTTGGGTTTCATCAAACAGGTGTTCTTAGGATTCCTTGTGAAGTTGCTGTTTTTGAGAGTATTTTGAAGATGGTGGAAGGAAAAGAGGACAAGTTTTCTTCCCAAGATTGTAGACTCAGCATTGAAGAGATTATGATGGGGTATTGCTCAGAAAACCAACTTGCTTATTCTCACCATCCTCAAAGTCCATTGTGTAGATAG 522 0.4195 MSSTDLKKSNKIREIVRLQQILKKWRKLANTSKITTTGATTTTTSKSMKFLKRTLSLSEREGGSTSNVVPKGYLAVCVGEDLKRFTIPTEYLGHQAFQILLREAEQEFGFHQTGVLRIPCEVAVFESILKMVEGKEDKFSSQDCRLSIEEIMMGYCSENQLAYSHHPQSPLCR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00329 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 49 128 IPR003676 GO:0009733
Pste8g00329 173 Pfam Auxin responsive protein 24 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00329 Pste-Chr8 1781518 1782039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00329 5 173 Calmodulin-binding Proteins AT4G31320 48.969 1.52e-55 172