Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00326 GAAGTGTGAAGAAGTCTCCAATCACATGCATGCCCAGTCCTCTTTACTTTTAGCTGCAAAAGTGCTGGGTCCTTGCATTAGTTCTTTATTGTTTTGGCTTCAAAGTTCAGAATCATGCTTTCCTTTTCATTTAAGGTCCTATGACTCTAGTGGGTTTAGCATTGAGCCTGTGCAGAATCTGGAGTCATGCAGCTACCTGCAAAGTGGGAACCTAGACTACTACTCATCCTCTGATAACAGTGCCCATGCAACCTACCCTTCTGTTTGTACTTTTGAACAATATTGCACCCTAGAATCTTCTACCAACAACAATCTCCCTTCCCTAAATTCCCCATCTATTATCAGTTTCTCACCGAAGAATAGTCCAGTCTCAAAGCTACAGTCAAGATCACATGTGCTGAGTTCGCAAAATTCTCTTGAAATTGTTAATGATTCGCTAGAAAACGAATCTTGTTTGACACATAAGGATGATGAACTGAGGCACAAGATAAGGGAGCTTGAAAGTGCTATGTTGGGACATGATACAGATATTCTAGATACCATAATTCCAGAAGAATCTGATTCATTTTTGTTAGAGGCAGAAAGGTGGAAGAGAATGATGGAAATGATATCTAGAGGAAATTTGAAAGAGATGCTTTGTACATGTGCAAAAGCAGTGGCGGGAAATGATATGGAGACAACTGAATGGTTGATGTCAGAGTTGCGTAAAATGGTCTCTGTCTCAGGCAACCCACTCCAACGATTGGGAGCGTACATGTTGGAGGCTCTTGTTGCAAGGCTGGCCTCTTCGGGAAGCACAATCTACAAAGCCTTGAAATGTAAAGAGCCTACTGGTAGTGAACTCCTTTCACACATGCATCTACTTTATGAAATCTGCCCATATCTCAAATTTGGGTACATGTCAGCAAATGGAGCTATTGCTGAAGCCATAAAGGAGGAAAGTGAAGTCCACGTTATTGATTTTCAGATTAACCAAGGAATACAGTGGGTAAGCCTAATCCAAGCTCTTGCTGGCAGACCTGGAGGACCCCCCAAGATTAGAATAACAGGTTTTGATGACTCCACTTCAGCTTATGCCAGGGGAGGGGGCCTTGAAATTGTTGGAGAAAGATTATCAACACTTGCCAAATCATATAGTGTACCCTTTGAGTTCCACGTTGGAGGAGCTCCTCCTACTGAAGTTGAACTTAAAAATCTTCAACTTCAACCTGGTGAAGCTATTGCTGTGAATTTTGCCATGATGCTGCACCATGTTCCAGATGAAAGTGTGGATATTCAGAATCATCGAGACCGATTGGTGAGATTGTCCAAGTGCTTGTCTCCTAAAATTGTGACACTAGTAGAACAAGAATCAAATACCAACAACCTCCCCTTCTTCCCCCGTTTTGTTGAGACAATGAACTACTACTTGGCTATTTTTGAATCAATTGATGTTGCTCTTCCAAGGGAGAACAGAGAAAGGATTAATGTGGAACAGCATTGTTTGGCCCGAGAAGTTGTCAACTTGATAGCATGTGAAGGGACAGAAAGAGTGGAACGTCATGAGCTTCTGAAGAGGTGGAGATCACGTTTCACTAAGGCTGGATTTACGCCCTATCCATTGAACTCCTTTATTACGTGTTCAATAAAAAATCTTCAGCAAAGCTACGAAGGACTTTACACTCTAGAAGAGAGAGACGGGGCTCTATGTCTTGGTTGGATGAATAAAGTTCTTATTACCTCGTGTGCTTGGAGGTGCTGA 1741 0.4216 MHAQSSLLLAAKVLGPCISSLLFWLQSSESCFPFHLRSYDSSGFSIEPVQNLESCSYLQSGNLDYYSSSDNSAHATYPSVCTFEQYCTLESSTNNNLPSLNSPSIISFSPKNSPVSKLQSRSHVLSSQNSLEIVNDSLENESCLTHKDDELRHKIRELESAMLGHDTDILDTIIPEESDSFLLEAERWKRMMEMISRGNLKEMLCTCAKAVAGNDMETTEWLMSELRKMVSVSGNPLQRLGAYMLEALVARLASSGSTIYKALKCKEPTGSELLSHMHLLYEICPYLKFGYMSANGAIAEAIKEESEVHVIDFQINQGIQWVSLIQALAGRPGGPPKIRITGFDDSTSAYARGGGLEIVGERLSTLAKSYSVPFEFHVGGAPPTEVELKNLQLQPGEAIAVNFAMMLHHVPDESVDIQNHRDRLVRLSKCLSPKIVTLVEQESNTNNLPFFPRFVETMNYYLAIFESIDVALPRENRERINVEQHCLAREVVNLIACEGTERVERHELLKRWRSRFTKAGFTPYPLNSFITCSIKNLQQSYEGLYTLEERDGALCLGWMNKVLITSCAWRC 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00326 571 Pfam GRAS domain family 201 570 IPR005202 -
Pste8g00326 571 ProSiteProfiles GRAS family profile. 191 570 IPR005202 -
Pste8g00326 571 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 149 564 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00326 Pste-Chr8 1762824 1766013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00326 79 570 GRAS Transcription Factor Family AT1G50600 59.839 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste8g00326 GRAS 1.6e-129 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00326 8 1762824 1766013 Pste8g00326 8 1762824 1766013 ECH
Pste7g01398 7 12726263 12727903 Pste8g00326 8 1762824 1766013 PCT