Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00324 CCACCAACGCGTTTCTTTGTGGGACTCATGTTCCAGATATGGTTTCAAGTAAAAACGACGCCGTTTTTTAAATAAAGAAGAGATTCTGATTTAGGGTTTTGGAGTATATTCTTTTCTGTTTCTCTCCTTAACAATGGCTGCTATTATGTCTCTCTATCCCCTGCTCCCTTCTCAATTTTGGAATTTGGAGAGAGGGCGTTTGAATTCTGCTAGTTGGAATAATTGGCTGAAACTTGCTGCACATTCCAATCCGAACATTCTCAAGACCAACAGGAAGTCCAAGTATGGAGAGGCACTGTCACTGTACGATAGTGACGAAGACGATGAAGAAATCGACGACGACGATTGGCTTTCTGATGAGGAATTTGCTGAGCCTGCTGACTTTGATGCTAATAACAAGAGATTTAAGTCAAAGATAACTGAATCTGAAGGAAAAGATAGGCAACAGGAATGGGAGCGGGGTTTGAGATCTCTTGACAATGAACAAAGCTTTAGATTGCCTAGAAGTGAGAGAGTAGCATTCTTACAGCGAAATGAGAGTGGAAAGCCTAGTAGAAATGTAAAGGATAAAAAATATCCACGGTTGTCCGAGGAGATTCCTTTGGATGTGAAATGGTTACCACTTCTTGATTACTTAAGCACTTTTGGAATGAAGGAATCACACTTTGTCCAAATGTATGAGAGACACATGCAATCACTTCAAATTAATGTATGTTCCGCACAGGAAAGGTTAGAATACTTATTGAGTGTTGGTGTTAAACATAGAGATGTAAGAAGAATCCTTTTGAGGCAGCCACAAATTCTAGAGTATACAGTGGAGAAAAATTTAAAGTCTCGTGTTGCTTTCTTGAGGGGCCTGGGCATATCCAATTCTAGAATCGGGCAAATCATCGCTGCTGCTCCATCCTTGTTTTCTTATAGTGTTGAGAATTCATTAAAACCAACAGTTAGATATTTAGTTGAGGAAGTTGGCATCAAGGAAAAAGATTTGGGTAAGGTAATTCAGCTTAGTCCCCAAATTCTTGTGCAGAGAATTGACATTTCATGGAATACTCGTTATATGTTTCTTACCAAAGAGTTGGGTGCACCCAGAGACTGCATTGTGAAGATGGTAACAAAACACCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATTCGGACATCGTGAAAGTTTTGACTAGCCTTACACAGGTGCTATCTCTGTCCTTGGAGGAGAATCTAAGGCCCAAATATTTGTACTTGGTTAATGAACTTAATAATGAGGTGCAATCCTTGACCAAATACCCGATGTATCTTAGCTTATCTTTAGACCAGAGAATTCGTCCTCGTCATAGGTTCTTGGTTTCCCTCAAGAAAGCTCCAAAAGGACCATTTCCACTTGGATCTCTAGTTCCAACAGATGAATGCTTTTGCCAACAGTGGGCTGGAACTAGTTTGGATAAATATTTGGCATTTCGTCAGAGATTATTACTTAAAAAGTTTGCTGCGAAATATGAAAGAAACATGTGACTGATCAGAATCAACTTTTTATCAGTCAGCTTGCATGAGTACTGGAAGAAGAATCTGCTATAATATTATCGTCATGCAACATGTTGCTATAAAATGTTCTTGATGTTCCAGGCTGTGGCTGAAGCTCAAGTTATAGTTTAATCGGCCATTCGGCATACTGTCTGCACATGATTTCATGACACTCAAGCATCAGTGTCTGATTCTTAGCAGAAGCCGCTCAACTAATTTTTCTGAAATTTATTATTGCTGTACTTGAGGCCGAAAAGCAGAACACATCATGTTGCAGTTTGTGACACTAAGGTTGTGGACAATATTGCAAACGTATAGGTATAGATTGAAATTGCATCAACTAAGATCCAACTTGTGGATTCTGTCATCGCTACTCATGTTTCCTTTTTACCTTCAATGTTGTGCACGTGTAGATATATCTTTTTATTGTTTTCAATCTTGTGTATCTGAAATCAATAGAACTTTCGTTACCTTTGTCACCATCAACAGAACTATACATAATTTTTTTGCTACCCTGCGGCCATTTGTATTACAT 2099 0.3878 MAAIMSLYPLLPSQFWNLERGRLNSASWNNWLKLAAHSNPNILKTNRKSKYGEALSLYDSDEDDEEIDDDDWLSDEEFAEPADFDANNKRFKSKITESEGKDRQQEWERGLRSLDNEQSFRLPRSERVAFLQRNESGKPSRNVKDKKYPRLSEEIPLDVKWLPLLDYLSTFGMKESHFVQMYERHMQSLQINVCSAQERLEYLLSVGVKHRDVRRILLRQPQILEYTVEKNLKSRVAFLRGLGISNSRIGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRYMFLTKELGAPRDCIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDIVKVLTSLTQVLSLSLEENLRPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAAKYERNM 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00324 473 Gene3D Transcription termination factor 3, mitochondrial 223 460 IPR038538 -
Pste8g00324 473 FunFam Transcription termination factor MTERF9, chloroplastic 225 460 - -
Pste8g00324 473 SMART mt_12 214 245 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 SMART mt_12 393 424 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 SMART mt_12 287 319 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 SMART mt_12 324 355 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 SMART mt_12 250 282 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 SMART mt_12 360 392 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 PANTHER CGI-12 PROTEIN-RELATED 163 444 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 Pfam mTERF 228 420 IPR003690 GO:0003690|GO:0006355
Pste8g00324 473 Pfam mTERF 165 239 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste8g00324 mTERF 6.6e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00324 8 1754542 1757373 Pste8g00324 8 1754542 1757373 ECH