Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00316 TACAATCCTTTTCACTTCACTTCTCTGCCACTGCAAACTGCAAACTGCTCCTACAACACATTTCACACCCCATTTTCAACTTCCAAAAAAACAACCTTGTCTTCCTTCGCTACTATGTTGTTGTTGTCACCTCTTTCCACTGCTTTTCTCCTCAAACCCATTTTCCTTCATGGCTTATCCGCCTTTATCCACCTTCTGCTACTCGTCACACTTTTGCTGACATGGCTTTGGAAGAAAATCGCAGCAGGAGTCAGTGACGAGTCTAAGGAGAAACCCAATAACACCCTCTTCAAATCCACCGTGTTTTGTTCTCTTGCTGTTTCTGCCTTCTGTCTCGTCCTCTGTTTCTTTAACTACTTCTTTTGGTACACTAGTGACTGGTCAGAAGAAAAGTTCGTCACCCTTTTGGCTTTGGCGCTGAAAACACTTGCGTGCGGCGCTGTTTGTGTATGCTTGCTCAAGGGCTTCTTCAGTTGCGATGAAAGAAGGTTCTCATTCTTCTTCAGATCTTGGTGCGCTTTCTACCTCGTTGTTTCTTGTTATTGCTTCGTCGCGGACATTATTGTTCTATCTAAGACACACGTTGCTTTGCCAACTCAGTACTTGGTTTCCGATATGGTCTCCTGTGGTGTTGGTTTGTTCTTCTTTTACGTGGGCTATTTTGTGAAAAACGAGGTTCATGTTGATAACGGTATTCAGGAACCTCTTTTGAATGGTGATGCCTTGGGATCAAAAGAGACCAAGGGTGGTGACACTGTCACTCCTTTCTCATATGCTGGAATTTTGAGCCTTCTTACCTTCTCTTGGGTGGGTCCTCTTATAGCCGTTGGCAATAAGAAAATCCTGGACCTTGAGGATGTTCCTCAGCTAGACAGCAGAGATAGTGTGATTGGTGCTTTTCCAACTTTTAGAGAGAAAGTTGAGGCTGATTGTGGTGCAATTAACAGTGTTACCACGCTTAAGCTGGTGAAATCATTATTAATGTCAGCGTGGAAGGAGATTCTTTTCACAGCTTTTCTTGCACTCTTAAATACTCTGGCTTCTTATGTTGGTCCTTATCTTATTGATGGTTTTGTTCAGTACCTCGATGGACGACGGCAGTATGAAAACCAGGGGTATGTTTTGGTTTCTGCATTTTTCTTTGCAAAGCTTGTGGAGTGTCTGTCCCAAAGGCATTGGTTCTTTAGGTTGCAACAAGTTGGACTCCGAATCCGAGCACTGCTTGTCACGATGATCTATAACAAAGCTTTGACCCTTTCTTGTCAATCAAAGCAAGGCCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCGGAAAGAGTTGGTGTCTTCAGCTGGTACATGCATGATTTGTGGATGGTAGCTCTGCAAGTTACTTTGGCTTTGTTGATTTTGTATAAAAACCTTGGGCTGGCTTCAATTGCTGCTCTTATGGCAACTATTGTTATTATGTTTGCAAATGTTCCCTTGGGATCATTGCAAGAGAAGTTTCAAAAGAAGTTGATGGAATCAAAAGATACAAGAATGAAGACTACATCTGAGATATTAAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCAAAAATAACTGAGCTCAGGAAAACTGAGCAAAGTTGGCTAAGAAAATATGTTTATACTGCAGCCATGACCACATTTGTATTTTGGGGTGCCCCCACATTTGTATCTGTGGTTACTTTTGGTACTTGTATGCTTATGGGGATCCCCCTTGAATCAGGGAAGATCTTGTCTGCACTTGCTACATTTCGAATTCTTCAAGAGCCCATTTACAGTCTTCCAGATACAATTTCGATGATAGCTCAAACTAAAGTTTCTCTTGATAGGATCTCATCATTCCTTCGTCTTGATGACTTACAATCTAATGTTGTAGAGAAGCTTCCTTGGGGCAGTTCTGATACAGCAATTGAAGTAGTTGATGGAAACTTCTCTTGGGATTTATCTTCCCCTAATCCAACATTACAAAATATAAATCTTAAAGTTTTTCACGGGATGAGGGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTTCTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAGAGTTTGTGGATCGAAGGCCTATGTTGCTCAATCTCCATGGATACAAAGTGGCAAGATAGAGGATAATATATTGTTTGGAAAACACATGGATGTGGAAAGGTATGAGAAGGTACTTGAAGCTTGTTCCTTGAAGAAGGATCTGGAGATTTTGCCATTTGGTGATCAGACAATTATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCACTTTACCAAGATGCTGATATATATCTATTGGATGATCCTTTTAGTGCTGTGGATGCTCACACAGGCTCTCACCTCTTTAAGGAATGCTTGCTGGGCCAGTTAAGTTCAAAGACAGTTGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTGATGAAAGATGGGAAAATTACTCAATGTGGAAAATATACTGATCTGCTGGATAGTGGTGCTGATTTTATGGAACTTGTAGGTGCACACAAAAAAGCATTGTCTACACTAGATTCATTGGATAGAGTGATGATATCTAATGAAATAAGCACCTTGGAACAAGATGTAGACGCCTCTAGCACACATGGTTTTATAGAAAAAAAGGCTGGTAAAGAGGAAAAAAATGGTAAAACAGACAACAAAAGTCAACCAAAACAGGACAGCTTGTTCAGGAAGAAGAAAGAGAGAAAGGTAAAGTTGGTCTATTGGAAATGTATCACAACAGCATATAGAGGAGCTCTTGTACCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGTAATTATTGGATGGCTTGGGCAACTCCTATCTCAACAGATATGGAGCCACCTGTTGAAGGAACGACTCTTATAGTAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGCAATGCTTCTTGTCACAGCTGGTTATAAAACAGCTACTATACTCTTTAATAAAATGCACTTTTGCATTTTCCGTGCCCCAATGTCATTTTTCGATTCCACTCCAAGTGGGCGAATCCTTAATAGAGCTTCAACTGATCAAAGTGCACTGGATACGGACATTCCTTATCAAATTGCATCATTTGCCTTCATTATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAAGCTGCATGGCAGGTTTTTGTTGTCTTTATACCTGTGATAGCAGTTAGCATCTGGTATCAGCAATATTATATTCCCTCAGCTCGAGAACTATCACGTCTGGTTGGAGTCTGCAAAGCCCCAATCATTCAACATTTTTCTGAAACAATTTCTGGCCTCGCTGGTTTAGCTGTTACATATGGACTTAATTTGAACATGATACAAGCTTGGATGATATGGAATCTCTGCAAGATGGAGAACAAAATTATATCAGTAGAAAGAATAATTCAGTATACTTGTATTCCTAGTGAGCCTCCTCTTGTTGTTGATGAAAATCGACCAGATCCTTCTTGGCCCTCATATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTCCCACTTTTGCTGTGTGGTCTTACATGTAAATTTCGTGGAGGACTGAAAACTGGCATTGTTGGAAGAACAGGAAGTGGTAAATCTACTCTCATACAAACACTTTTCCGAATTGTTGAGCCTACTGCTGGGCAAGTTATGATTGACAACATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGATTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTGAGAAGTAATCTGGACCCCCTGGAAGAATACACTGATGAGCAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGGGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGATTCCGCAGTTACTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTCTGCCTTGGTAGGGTGATGCTTAAGAAAAGCAGGGTTTTGGTTCTTGACGAAGCCACTGCATCAGTTGATACAGCTACAGATAATTTGATCCAGCAAACTCTTAGGCAACATTTCTCTGACTCTACAGTCATAACCATTGCACATCGAATAACATCTGTTCTCGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTAAGGAGTACGACACCCCAACAAGGTTGCTAGAAAATAAATCATCATCTTTTGCTCAACTTGTTGCTGAGTATACCATGAGATCCAACTCCAGTTTTTAG 4362 0.4085 YNPFHFTSLPLQTANCSYNTFHTPFSTSKKTTLSSFATMLLLSPLSTAFLLKPIFLHGLSAFIHLLLLVTLLLTWLWKKIAAGVSDESKEKPNNTLFKSTVFCSLAVSAFCLVLCFFNYFFWYTSDWSEEKFVTLLALALKTLACGAVCVCLLKGFFSCDERRFSFFFRSWCAFYLVVSCYCFVADIIVLSKTHVALPTQYLVSDMVSCGVGLFFFYVGYFVKNEVHVDNGIQEPLLNGDALGSKETKGGDTVTPFSYAGILSLLTFSWVGPLIAVGNKKILDLEDVPQLDSRDSVIGAFPTFREKVEADCGAINSVTTLKLVKSLLMSAWKEILFTAFLALLNTLASYVGPYLIDGFVQYLDGRRQYENQGYVLVSAFFFAKLVECLSQRHWFFRLQQVGLRIRALLVTMIYNKALTLSCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVTLALLILYKNLGLASIAALMATIVIMFANVPLGSLQEKFQKKLMESKDTRMKTTSEILRNMRILKLQGWEMKFLSKITELRKTEQSWLRKYVYTAAMTTFVFWGAPTFVSVVTFGTCMLMGIPLESGKILSALATFRILQEPIYSLPDTISMIAQTKVSLDRISSFLRLDDLQSNVVEKLPWGSSDTAIEVVDGNFSWDLSSPNPTLQNINLKVFHGMRVAVCGTVGSGKSTFLSCVLGEVPKISGILRVCGSKAYVAQSPWIQSGKIEDNILFGKHMDVERYEKVLEACSLKKDLEILPFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGQLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYTDLLDSGADFMELVGAHKKALSTLDSLDRVMISNEISTLEQDVDASSTHGFIEKKAGKEEKNGKTDNKSQPKQDSLFRKKKERKVKLVYWKCITTAYRGALVPFILLAQILFQALQIGSNYWMAWATPISTDMEPPVEGTTLIVVYVGLAIGSSFCILARAMLLVTAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSALDTDIPYQIASFAFIMIQLLGIIAVMSQAAWQVFVVFIPVIAVSIWYQQYYIPSARELSRLVGVCKAPIIQHFSETISGLAGLAVTYGLNLNMIQAWMIWNLCKMENKIISVERIIQYTCIPSEPPLVVDENRPDPSWPSYGEVDIQDLQVRYAPHLPLLLCGLTCKFRGGLKTGIVGRTGSGKSTLIQTLFRIVEPTAGQVMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVMLKKSRVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIKEYDTPTRLLENKSSSFAQLVAEYTMRSNSSF 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00316 1453 Gene3D ABC transporter type 1, transmembrane domain 314 631 IPR036640 GO:0005524|GO:0016020
Pste8g00316 1453 MobiDBLite consensus disorder prediction 910 931 - -
Pste8g00316 1453 SMART AAA_5 676 849 IPR003593 GO:0016887
Pste8g00316 1453 SMART AAA_5 1235 1420 IPR003593 GO:0016887
Pste8g00316 1453 Pfam ABC transporter 667 801 IPR003439 GO:0005524
Pste8g00316 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1201 1440 IPR027417 -
Pste8g00316 1453 Gene3D - 643 877 IPR027417 -
Pste8g00316 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 649 872 IPR003439 GO:0005524
Pste8g00316 1453 FunFam ABC transporter C family member 10 318 631 - -
Pste8g00316 1453 Gene3D ABC transporter type 1, transmembrane domain 881 1185 IPR036640 GO:0005524|GO:0016020
Pste8g00316 1453 CDD ABCC_MRP_domain2 1207 1427 - -
Pste8g00316 1453 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 960 1145 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g00316 1453 FunFam ABC transporter C family member 3 1192 1444 - -
Pste8g00316 1453 SUPERFAMILY ABC transporter transmembrane region 957 1191 IPR036640 GO:0005524|GO:0016020
Pste8g00316 1453 FunFam ABC transporter C family member 5 634 881 - -
Pste8g00316 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 645 871 IPR027417 -
Pste8g00316 1453 CDD ABC_6TM_ABCC_D2 958 1184 IPR044726 GO:0140359
Pste8g00316 1453 Pfam ABC transporter transmembrane region 960 1145 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g00316 1453 Pfam ABC transporter transmembrane region 335 602 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g00316 1453 ProSitePatterns ABC transporters family signature. 774 788 IPR017871 GO:0005524|GO:0016887
Pste8g00316 1453 Pfam ABC transporter 1229 1374 IPR003439 GO:0005524
Pste8g00316 1453 CDD ABC_6TM_ABCC_D1 336 623 IPR044746 GO:0140359
Pste8g00316 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1209 1443 IPR003439 GO:0005524
Pste8g00316 1453 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 335 615 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste8g00316 1453 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 257 1146 - -
Pste8g00316 1453 SUPERFAMILY ABC transporter transmembrane region 325 627 IPR036640 GO:0005524|GO:0016020
Pste8g00316 1453 CDD ABCC_MRP_domain1 649 849 - -
Pste8g00316 1453 Gene3D - 1192 1445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00316 Pste-Chr8 1693963 1700652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00316 649 879 Calmodulin-binding Proteins AT2G36910 30.709 4.69e-24 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00316 8 1693963 1700652 Pste8g00316 8 1693963 1700652 ECH