Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste8g00311 | GTCACTAGCAAGATTGGCAAATCAATATGTCCTCTCATGCTGCATAGTGATATCTTCGCCCCAATGGCCAAAGAAGTGATGAACACACATGATATCATCTTTGCAAATAGCTTGCTGCTCATATTCTCGGTTATGGCTCTAAGACCATTTCCTTCTGCCCAAAGCGAGTTGAGTCATTCAGATCAATCACGGAACAAGAGGTCACCTATTAATCTCACTAAGAAAATTAATTCATTGGAACATATGAAGGGTGTTACTGAGACAGTTGCAGGGTTCTCTCTGGCTGATCTGTATCCTTCCATTGGACTTCTTCAACTTCTTACTGGGATTAGGACTAAAGGATCACAGAGACAAAAATTAAGACACACGGGCTTTGCTTTTGGTGATCAAAGTGGGGAAGATCTAGTTGATGCTCTTTTAAGGCTTCAGAACAATGGTGACCCCAACTCCCCTTGTCTGACAGTATTGTCAAAGCTACCATTTTTCGTCGGGATGGAGCTTAACATTTCCTCATCTATAATTCTTCCTTTCTTCCTCTTAGTGTTGATGCTACTAATCAACATAAATTGGAGATCAAAAAGCAAGAATCCAAACTCCAAGTTGCCACCAGGACCAAGGAAGTTACCTCTCATAGGTAACATGCACCAACTTGGAACTCAGCCTCATCGGTCCCTAGCAAGATTGGCAAATCAATATGGTCCTCTCATGCATGTCCAGCTTGGTGAGCTCTGTTGCATAGTGGTATCTTCGCCACAAATGGCCAAAGAAGTGATGAACACGCATGATATCATCTTTGCAAATAGGCCTCATGTGCTAGCTGCTCATATTATCTCTTATGGCTCTAAGGGCATGACCTTCAGCCCTCATGGACCTTACTGGAGGCAGATGAGAAAGATTTGTACCATAGAGCTACTAGCCCCAAAGCACGCTGACTCCTTCAGATCAATCAGAGAACAAGAGTTGTCAAATCTTGTCAAAGATATATCTTTATGTGAAGGGTCACCTATTAATCTCTCACACAAAATTAATTCGTTGGCATATGGTCTTATATCACAGATTGCTTTTGGCAAAAAATCCAAAGACCAACAGGCTTATATTGAACATATGAAGGGTGTTAGTGAGACAGTTGCAGGGTTCTCTGTTTCTGATCTGTACCCTTCTATTGGACTTCTTCAACTTCTAACTGGGATTAGGACTAAAGTTGAGAAGATACATCGAGGAATGGATAGAATACTTGAGAACATTGTCAGGGATCACAGAGAAAAAAATCTGGACACCCAGGCTGTTGGTGGAGAAGATCTAGTTGATGTTCTTTTAAGGCTTCAGAAAAATGGTGAACTCCAACACCCCTTATCTGACAGTGTTGTCAAAGCAACCATTATGGACATATTCAGTGCTGGAGGCGAGACTTCTTCAACAGCTATGGATTGGGCAATGTCAGAACTGGTGAAGAACCCAAGAGTGATGGAGAAAGCACAAATGGAGGTAAGAAGGGTATTTGATGGAAAAGGATACGTGGATGAAACAAGTATTAATGAACTGAAATACTTGAGATCAGTTATCAAAGAAACTTTGCGTTTACATCCACCTGTTCCATTGCTGCTTCCAAGGGAATGCAGTGAGAAATGTGAGATTAATGGGTATGAGATTCCAGCCAAAAGCAAAGTGATTGTGAATGCATGGGCAATTGGGAGGGATCATAAGTATTGGACTGAAGCTGAGACATTTTATCCTGAAAGATTCCTTGATAGCTCAATTGATTACAAAGGTGGTGAGTTTGAATTTATTCCATTTGGAGCTGGAAGAAGGATATGCCCTGGCATCAATCTTGGCATGGTTAATGTGGAATTCTCACTTGCAAATTTGCTTTTCCATTTTGATTGGAAGATGCCTCAAGAACTTGATATGTCTGAATCCTTTGGCTTGGCAGTAAAAAGAAAACAGGATCTGCAGTTGATTCCTATTGCATATCACTCAGCTACAAGTTAAGAAGAGCCAGCTGCCACAGTCCCAATTTCCATATCAAACATAAATAATTGTCATTAACTTGGTTATACTATATAGTTGCTGTGAGTTACAAATCATGTAATACAGTCGTAGTTACTCCAAGATAAG | 2115 | 0.4076 | VTSKIGKSICPLMLHSDIFAPMAKEVMNTHDIIFANSLLLIFSVMALRPFPSAQSELSHSDQSRNKRSPINLTKKINSLEHMKGVTETVAGFSLADLYPSIGLLQLLTGIRTKGSQRQKLRHTGFAFGDQSGEDLVDALLRLQNNGDPNSPCLTVLSKLPFFVGMELNISSSIILPFFLLVLMLLININWRSKSKNPNSKLPPGPRKLPLIGNMHQLGTQPHRSLARLANQYGPLMHVQLGELCCIVVSSPQMAKEVMNTHDIIFANRPHVLAAHIISYGSKGMTFSPHGPYWRQMRKICTIELLAPKHADSFRSIREQELSNLVKDISLCEGSPINLSHKINSLAYGLISQIAFGKKSKDQQAYIEHMKGVSETVAGFSVSDLYPSIGLLQLLTGIRTKVEKIHRGMDRILENIVRDHREKNLDTQAVGGEDLVDVLLRLQKNGELQHPLSDSVVKATIMDIFSAGGETSSTAMDWAMSELVKNPRVMEKAQMEVRRVFDGKGYVDETSINELKYLRSVIKETLRLHPPVPLLLPRECSEKCEINGYEIPAKSKVIVNAWAIGRDHKYWTEAETFYPERFLDSSIDYKGGEFEFIPFGAGRRICPGINLGMVNVEFSLANLLFHFDWKMPQELDMSESFGLAVKRKQDLQLIPIAYHSATS | 662 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste8g00311 | 662 | FunFam | Cytochrome P450 71D8 | 194 | 654 | - | - | |
| Pste8g00311 | 662 | PANTHER | OS08G0105600 PROTEIN | 225 | 658 | - | - | |
| Pste8g00311 | 662 | Gene3D | Cytochrome P450 | 186 | 655 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | Pfam | Cytochrome P450 | 202 | 640 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | P450 superfamily signature | 596 | 605 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | P450 superfamily signature | 519 | 530 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | P450 superfamily signature | 466 | 483 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 598 | 607 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 559 | 583 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 455 | 472 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 475 | 501 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 345 | 363 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 605 | 628 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 518 | 536 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 229 | 248 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 253 | 274 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | PRINTS | E-class P450 group I signature | 595 | 605 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste8g00311 | 662 | CDD | CYP71-like | 231 | 650 | - | - | |
| Pste8g00311 | 662 | SUPERFAMILY | Cytochrome P450 | 202 | 654 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste8g00311 | Pste-Chr8 | 1676797 | 1681975 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste8g00311 | 173 | 655 | Cytochrome P450 | AT5G25120 | 40.562 | 1.48e-133 | 400 |