Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00302 ATGAATACATCTCCCTCTCAACATGCTATCACTTTTGCATTGTTGCTATGTGCATTAATCGTGTTCAACATTGGCTTGTGCAGCTCCAATATCCGTTGCAACCAAAGAGACAAACATGCTCTATTAAAGTTTAAGAAAGGAATCATAGATCCATCTGGGGTTCTCTCTTCATGGTCCACTGAACAAGATTGTTGTCAATGGAGAGGAGTTAATTGTGACAACATCACAAGTAGAGTCATAGAGCTCCATCTCACCTGTTCTACAACTCTTCCAAGTTACATTGACAAAGAAGATAAGTCACACTGTCTCACAGGTTCCATTTACCTTTCCTTGCTAATAGTGGAGGTGAAATTTCTGAATTATTTGAATTTGAGGAATAATGACTTCTTAGCTATCCAAACTGATTATGTGCATAGTCAAATTTGTCATAACCTATCTTCAATTACTTCTCCTCACTGTGTCAACTCATCATCTCTTCGTTATCTTGATTTATCACTTAATTGGAATCTTGTCATCTATAGCCTTCAATGGCTTCCTCACATTTCTTCCTTGGAATATCTCAACCTTCGTGGGATTGATCTTCACAGGGAAACTAATTGGCTTCAATTAGTGACTAAGCTTCCATCACTTTCGGTGCTCAACATGCGTAGTTGTCAACTTGAAGACTTGAGTTTGTCTATTCAGTATGCTAATTTTACTGCACTTGAAGTTCTTCATCTCTCAGCAAATGAATTTAACTCAGAGTTTCCTAAATGGCTATTCAATCTAAGTTGCAGTATCTCTGTTTTGGACCTTAGCTCATGTTCTTTAATAGGTCGTTTACCCAAGGCATTATTAAATCTTCGAAAACTAGAAGACTTGGTCTTGGAAGATAATAACTTGAATGGGAATATTCCAAATTGGTTAGGCAAATTTGAACATCTACAAACTCTTATTCTTGGAGTAAACATGTTTTCTGGATCTATTCCCACAAATTTGGGAAATCTATCATCCTTAATTACCTTGGATACTGCCTCAAATCCAATGACAGGAGTTGTGTCTGAGAAAATTTTTGCCAAATTATCAAAATTAAAGGAACTTGATATATACTCATATTCACCATTAATTTTTGATTTTGACTCTCATTGGGTTCCACCCTTTCAACTTAAAGAATTAGGTTTCAACTTTGTAGGTCCTAAATTTCCTTCGTGGTTATATACACAAAAATTTATTGAAAGTTTAACTATACATGAATCATCATTTAAGGCCCAAGGCAAATTTTGGAATTTTGTATCAAGAATCCCTGAACTCGTTTTAGGAGATAATTTGATAGATGGGAACCTGTCAAATGTGCTGTTGAACTCTACATACATTGATTTGTCATCAAATGGTCTAAAAGGTTGCTTGCCTCGATTATCACCAAACGTGGCCATTGCCTCATTAGCAAACAACTCCTTATCAGGAGGCATGTCTCCACTCTTATGTGATGATAAGATGCTAAATAGGAAAAACAAGTTGTTGTTCTTGGACATATCTGATAATCATTTATCTGGAGAGCTTACAAATTGCTGGAAGAATTGGAAGTCTTTAGTTGCTATTCACTTGGGAGGCAATAATCTAAAAGGAAAGATACCTTCATCATTGAGTTTGTTATCTAATCTTACCACACTCCATTTGCATGAGAATAAGCTCTATGGAGAGATTCCTTCCTCACTACAAAATTGCCACTCTTTGTTGATCTTTAATGTTCGCAATAACCACTTGTCAGGAAGCATTCCAAACTGGATACCACACAGTGCAAAGGCTCTCCAATTAAGGTCTAATAATTTTAGTGGTAAAATCCCACCACAGATATGCCAAATGTCTTCCCTCATTATTTTGGATATTGCAAATAATTCAATCTCAGGACATATACCCACCTGCCTTGGTAATATCACATCCTTAATTTTCAACAATGCTTCACGTTACTATCTGTCTTTTTCCTTTCCTTCATTTCATAATCGTTACTTCATTTATAATGATGCTCTCGAGTTGGTTACAAAAGGTCAAGTAAGAGAATATGCAAAAAACCTACATTTTGTGGCCTTAATTGATATGTCAAGTAATAATTTGTCTGGAACAATCCCACCCCAGATGTTTAGTCTCACTGGATTGAACACCTTGAACTTGTCCCATAATAAATTAACAGGACAAATACCAAATGAGATTGGCAACATGAAAAACTTAGAGTCCCTTGACTTTTCAACAAACCAACTTAGTGGTGAAATTCCTCAGAGCTTGTCTAGCTTGTCCTTTCTTGAATACTTAAACCTGTCATACAACAATTTGAAAGGCAAAATACCATCTGGCACACAGCTTATGGGATTTGATGCATTCAGTTATATGGGCAATCCTTATCTATGTGGACCTCCACTTACCAAAATTTGCTTCCAAGATGATAAACCAATAAATAAATTGATAAATGAAGATGGGGATAAATCTGAATTTTTTCCATGGTTTTGCATTGGAATAGAATCTGGATTTCTGACAAGCTTTTTGGGAGTTTTATGTGCCATTTTCTTCAATAGAAAATTGAGGCATGCTTTCTTCAAGTTTCTCTATGACATGAGAGATCGATTTATATCATGGTGGTCATCAATATGA 2622 0.3581 MNTSPSQHAITFALLLCALIVFNIGLCSSNIRCNQRDKHALLKFKKGIIDPSGVLSSWSTEQDCCQWRGVNCDNITSRVIELHLTCSTTLPSYIDKEDKSHCLTGSIYLSLLIVEVKFLNYLNLRNNDFLAIQTDYVHSQICHNLSSITSPHCVNSSSLRYLDLSLNWNLVIYSLQWLPHISSLEYLNLRGIDLHRETNWLQLVTKLPSLSVLNMRSCQLEDLSLSIQYANFTALEVLHLSANEFNSEFPKWLFNLSCSISVLDLSSCSLIGRLPKALLNLRKLEDLVLEDNNLNGNIPNWLGKFEHLQTLILGVNMFSGSIPTNLGNLSSLITLDTASNPMTGVVSEKIFAKLSKLKELDIYSYSPLIFDFDSHWVPPFQLKELGFNFVGPKFPSWLYTQKFIESLTIHESSFKAQGKFWNFVSRIPELVLGDNLIDGNLSNVLLNSTYIDLSSNGLKGCLPRLSPNVAIASLANNSLSGGMSPLLCDDKMLNRKNKLLFLDISDNHLSGELTNCWKNWKSLVAIHLGGNNLKGKIPSSLSLLSNLTTLHLHENKLYGEIPSSLQNCHSLLIFNVRNNHLSGSIPNWIPHSAKALQLRSNNFSGKIPPQICQMSSLIILDIANNSISGHIPTCLGNITSLIFNNASRYYLSFSFPSFHNRYFIYNDALELVTKGQVREYAKNLHFVALIDMSSNNLSGTIPPQMFSLTGLNTLNLSHNKLTGQIPNEIGNMKNLESLDFSTNQLSGEIPQSLSSLSFLEYLNLSYNNLKGKIPSGTQLMGFDAFSYMGNPYLCGPPLTKICFQDDKPINKLINEDGDKSEFFPWFCIGIESGFLTSFLGVLCAIFFNRKLRHAFFKFLYDMRDRFISWWSSI 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00302 873 Gene3D Ribonuclease Inhibitor 351 805 IPR032675 -
Pste8g00302 873 Gene3D Ribonuclease Inhibitor 33 350 IPR032675 -
Pste8g00302 873 PANTHER LRR RECEPTOR-LIKE KINASE 33 862 - -
Pste8g00302 873 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Pste8g00302 873 Pfam Leucine rich repeat 692 745 IPR001611 GO:0005515
Pste8g00302 873 ProSiteProfiles Leucine-rich repeat profile. 758 780 IPR001611 GO:0005515
Pste8g00302 873 FunFam Tyrosine-sulfated glycopeptide receptor 1 581 807 - -
Pste8g00302 873 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 226 322 - -
Pste8g00302 873 SUPERFAMILY L domain-like 33 363 - -
Pste8g00302 873 SUPERFAMILY RNI-like 388 586 - -
Pste8g00302 873 SUPERFAMILY L domain-like 252 799 - -
Pste8g00302 873 SMART LRR_typ_2 708 732 IPR003591 -
Pste8g00302 873 SMART LRR_typ_2 232 256 IPR003591 -
Pste8g00302 873 SMART LRR_typ_2 207 229 IPR003591 -
Pste8g00302 873 SMART LRR_typ_2 281 305 IPR003591 -
Pste8g00302 873 SMART LRR_typ_2 329 353 IPR003591 -
Pste8g00302 873 SMART LRR_typ_2 544 567 IPR003591 -
Pste8g00302 873 SMART LRR_typ_2 756 779 IPR003591 -
Pste8g00302 873 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 490 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00302 Pste-Chr8 1647980 1650601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00302 207 844 Receptor kinase-like Gene Family AT2G33060 34.114 1.94e-74 258