Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00301 TCTTGTCTTTTTATTGTCTTCATTTTTGCAAGTTCTGTTTCGAGTAGCCTAGTTTTCAACTTCTATGCAGCTTCATGCCCCACAGCAGAGTTCATTGTTAGAAACACAGTTAGTTCCTCTTCTTCTTCTGATCCTTCAATTCCTGGGAAGCTCCTTCGCTTGGTCTTTCATGATTGCTTTGTGGAGGGATGTGATGCATCTTTGATGCTACAAGGGAATAACACAGAACAAAGTGATCCAGCAAATAGATCTGTTGGAGGATTTTCTGTCATAGAGTCAGCTAAAAGAGAACTTGAGTTCCTTTGTCCTGGATCAGTTTCTTGTGCTGACATAATTGCTTTGGCTGCTAGAGATGCTGTTGAAATTGTTGGTGGTCCTATGATTCAAATTCCCACTGGGAGGAGAGATGGGATGGCTTCAGTTGCTTCAAGTGTCAGACCCAGCATTTTGGACACCAGTTTTACCATGGATGAAATGATTAACCGTTTCTCTAGTAAAGGGTTGTCTTTATTTGACCTTGTCATCCTTTCAGGGGCTCACACCATAGGAACAGCTCATTGTAGCTCATTCAGGGATAGGTTCCAAGAAGACTCAAAGGGAATGCTGACACTCATAGACAAAACCCTTAACAGTAGCTATGCTGATGAACTAATGAAAGAGTGTCCCATAAGTGCAAGTCCATTAGTGCAGGTTAACAATGATCCTGAAACATCTAAGGTCTTTGACAACCAGTACTACAGAAATCTTCTGACCAATAAGGGCTTGTTTCAATCTGATTCTGCTTTACTAAGTGATAATAGAACAAGGAAATTAGTGGAGGACTTGGCAAATGACCAAGAGTTTTTCTTTGAAAGTTGGGGCCAGTCATTCTTGAAGCTCACTGGTATTGGAGTCAAAACTGGTGATCAGGGTGAAATCAGACGTTCATGTGCATCAACTAATGCA 945 0.4127 SCLFIVFIFASSVSSSLVFNFYAASCPTAEFIVRNTVSSSSSSDPSIPGKLLRLVFHDCFVEGCDASLMLQGNNTEQSDPANRSVGGFSVIESAKRELEFLCPGSVSCADIIALAARDAVEIVGGPMIQIPTGRRDGMASVASSVRPSILDTSFTMDEMINRFSSKGLSLFDLVILSGAHTIGTAHCSSFRDRFQEDSKGMLTLIDKTLNSSYADELMKECPISASPLVQVNNDPETSKVFDNQYYRNLLTNKGLFQSDSALLSDNRTRKLVEDLANDQEFFFESWGQSFLKLTGIGVKTGDQGEIRRSCASTNA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00301 315 FunFam Peroxidase 20 161 - -
Pste8g00301 315 PRINTS Plant peroxidase signature 171 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 FunFam Peroxidase 150 293 - -
Pste8g00301 315 PANTHER - 4 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 PRINTS Haem peroxidase superfamily signature 172 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 CDD secretory_peroxidase 17 310 IPR033905 GO:0004601|GO:0042744
Pste8g00301 315 Gene3D Peroxidase, domain 2 150 293 - -
Pste8g00301 315 Pfam Peroxidase 33 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 SUPERFAMILY Heme-dependent peroxidases 17 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste8g00301 315 Gene3D - 20 314 - -
Pste8g00301 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 172 182 IPR019793 -
Pste8g00301 315 ProSiteProfiles Plant heme peroxidase family profile. 16 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00301 Pste-Chr8 1639048 1641244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00301 1 314 Peroxidase AT4G31760 64.038 5.15e-155 435