Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00291 CAGCTATAAAGTCCAAGTCTGAAAAATTCCCTTTTTTTCTTCACTTTTCCATAACCACATACCATAACCAATCTCCTCTTACCTCATTTCATGCCATAACCACAAGATGTCCACTTCTTCTGTCAATGGGAATGATTCGCTGACTGGCCACATCATATCCACTACAGTAGGAGGAAAAAAGGGGAAGCCCAAGCAGACTCTAAGTTACATGGCAGAACGCATTGTAGGGGCTGGGTCATTTGGAATTGTATTTCAGGCTAAATGCTTGGAAACTGGGGAACCAGTGGCCATTAAGAAGGTTTTACAGGACAGGAGATATAAGAATCGTGAGCTGCAGTTAATGCGCATGATGGACCATCCAAATGTGATCGCTCTGAAGCATCGTTTCTTTTCCACTACAAGTGCAGATGAACTTTTTCTTAACTTGGTCATGGAATATGTTCCAGAGTCTATGTATCGAGTCTCAAAGTTCTATAGTAATACTAATCAGAGCATGCCACTTATCTATGTAAAGCTTTACATGCACCAGATTTTCAGGGGGCTGGCTTATATCCACACTGTCCCTGGAGTTTGCCACAGAGATTTGACACCTCAAAATATACTGGTTGACCCTCTTACACACCAGGTTAAGATATGTGATTTTGGAAGTGCAAAAGTGCTGGTCAAAGGTGAAGCTAATATATCACATATATGTTCACTTTTCTATCGAGCACCGGAACTTATGTTTGGTGCCACTGAGTATACAACTTCAATTGATATTTGGTCAGCTGGTTGTGTCCTTGCTGAACTGCTTTTGGGCAAGCCATTATTTCCAGGCGAAAATGCTGTGGACCAGCTTGTAGAGATTATCAAGGTTCTTGGAACACCCACTCAGGAGGAAGTTTGCTCTACAGATCCAAACTACAGTGATTTCAAGTTTCCACAGAGTTTCCATGAAAAAATGCCTCCAGAAGCAATGGATCTTGCTTCCCAGCTTCTGCAGTATTCCCCAAGTCTTCGATGTACTGCGTTAGAAGCATGTGCACACCCATTCTTTGATGAACTCCGTGAACCAAATGCTCACTTGCCTGATGGTCGACCTTTCCCCCCTCTATTCAACTTTAGACAGGAGGAAGAGTTATCCGGAGCCTCTCAAGAGCTTATTGATAAGTTGATACCTGCCCATGTGAAGCGGAAGATAGGGCTACCATATGCCCATTTGGCTGGAACATGATGTTAAGCTTGGCAAAGTGTGTTCTAATGGATATAAGTTAATAGAGGGGTGTCATCTAATTCTCTATATATGAAGTTATTATACGGTGGCAGTGTAATCCTCTGCCTGACTAGGACCAACACTTGTGTTCTGGATTGCAGCAGTTGATCCACCTCTCCTGCCAGCATCTCTATATAGCATGGATACTCCAAAATTGAAGCTATACGCATACTGGTATTGGTACCACCTTAGGTACATACCCCTACCTGATACATGTTGGATATCCGTTGTTATGCACCATAATTTTATTTTCAGAAGGTTAAATTAGGTACTCAATATGGATACACCTTCGAACTCTTTGGTATCTACCATCCCAAACTTATGGTGGGTCATGTATGGTGCTACAATTCCCTAACATCTTTTTATCCATTCCTTCCATTAAAAGAAAACAGACTCAACCTTGTCTAAGTGGTTTGGTTTTTGTACATACAATGATACAAATCTTCGTCTCTTCTCGGGAATTAAGAATGATTTAGAAGATGGAAGCAAACTTTAATGATGTGTTTGAAGGGCCTAACGTTCTTGAAGTTGTTACTTTCTGTCTTTATGCACCAGATTTAGGTTAACATTGTTAGTGTGATATTCATTGTTGTGCTTAAGTTTTGGTCAGTTTCGCATCCTCATGTCAATTGTCTTATAAATATTTGAATGATATTCTGTTTGAGGAATTTTACTTTTCATATTATGTTAGGAGTTTATGTGTAGATTCGTCCTTTTGAGTGCACTATTTCTTTTGAACATGTTTACATGATTAATTAGTTTGTTGTAGATGGCAAATGAAAATTATCAATAAATATCATCTTAGGTACACATGACATTCAGT 2075 0.3986 MSTSSVNGNDSLTGHIISTTVGGKKGKPKQTLSYMAERIVGAGSFGIVFQAKCLETGEPVAIKKVLQDRRYKNRELQLMRMMDHPNVIALKHRFFSTTSADELFLNLVMEYVPESMYRVSKFYSNTNQSMPLIYVKLYMHQIFRGLAYIHTVPGVCHRDLTPQNILVDPLTHQVKICDFGSAKVLVKGEANISHICSLFYRAPELMFGATEYTTSIDIWSAGCVLAELLLGKPLFPGENAVDQLVEIIKVLGTPTQEEVCSTDPNYSDFKFPQSFHEKMPPEAMDLASQLLQYSPSLRCTALEACAHPFFDELREPNAHLPDGRPFPPLFNFRQEEELSGASQELIDKLIPAHVKRKIGLPYAHLAGT 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00291 368 CDD STKc_GSK3 29 313 IPR039192 -
Pste8g00291 368 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
Pste8g00291 368 ProSiteProfiles Protein kinase domain profile. 34 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00291 368 ProSitePatterns Tyrosine protein kinases specific active-site signature. 155 167 IPR008266 GO:0004672|GO:0006468
Pste8g00291 368 SUPERFAMILY Protein kinase-like (PK-like) 33 335 IPR011009 -
Pste8g00291 368 Gene3D Transferase(Phosphotransferase) domain 1 114 355 - -
Pste8g00291 368 Pfam Protein kinase domain 34 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00291 368 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Pste8g00291 368 FunFam Shaggy-related protein kinase kappa 114 355 - -
Pste8g00291 368 FunFam Glycogen synthase kinase-3 beta 18 113 - -
Pste8g00291 368 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 4 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00291 Pste-Chr8 1588567 1593501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00291 38 336 MAP Kinase Gene Family AT3G59790 35.514 1.09e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pste8g00291 Pkinase 2.2e-61 CL0016