Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00287 ATGGAGGAGGGAAGCTCCGATTGCGAGAGGGAGCGAATCCGCAACATCTGCATTCTGGCGCACGTGGACCACGGCAAGACCACCCTGGCGGACCACCTGATCGCGGCGGCGGGCGGCGGCGTGGTCCACCCGAAGCAGGCGGGGCGCGTCCGCTTCATGGACTACCTCGACGAGGAGCAGCGGCGCGCCATCACGATGAAGAGCTCGTCGATCCGGCTCCGGCACTGCGGCCACGCCGTGAACCTAATCGACTCCCCGGGCCACATGGACTTCTGCAGCGAGGTGTCGACGGCGGCGCGGCTCAGCGACGGCGCGCTCCTCCTCGTCGACGCCGTGGAGGGCGTCCACATCCAGACCCACGCCGTGCTCCGGCAGTGCTGGATCGAGCGCCTCACCCCTTGCCTCGTTCTCAACAAACTCGATCGCTTAATCACCGAACTCAAACTCTCTCCCTCCGAAGCCTACACGCGCCTCTTGCGCATCGTCCACGAGGTTAACGGAATCGTCAGCGCTTTCAAGTCCGAGAAGTATCTCTCCGACGTCGACTCTCTCCTCGCCGGCGCCGGCACTGGCGCCGGCGAGACTCTCGATGATTACGACGACAATGAGGACGTTTTTCAGCCTCAGAAAGGGAACGTTATATTCGCTTGCGCATTGGACGGGTGGGGGTTTGGGATTCGTGAGTTTGCTGAGATTTATGCTTCTAAGCTTGGGGCTAGTGTGAGTGCCTTGTTGAGAGCGTTGTGGGGAGCTAGGTTTTTTAACCCTAAGACCAAGATGATTGTGGGGAAGAAAGGTGCTGGTGCTAATAAGAAACCTATGTTTGTTCAGTTTGTGTTGGAGCCCTTGTGGCAGGTGTATCAGGGTGCCTTGGAAGGTGACAAGGGGTTGGTTGGGAAGGTTATTAGGTCTTTTAGTTTGAATGTGCCGCCGCGGGAGCTGCAGAATAAGGATGTCAGGGTTGTGCTTCAGGCGGTTATGAGCCGTTGGCTTCCTCTTTCTGAGGCGGTTTTGTCCATGGTGGTTGGTTGTTTGCCGGACCCTGTCGCCGCGCAGGGGTTTCGGATTTCGAGGTTGATTCCCAAGCGGGATGTTGTTGAGGAAGGGGCGGCGGCGGCGGCGGAGGCGGAGTTGGTCAGGAAGGCGGTGGAGGTGTGTGATTGTAGAGATGGGGTTCCTTGTGTGGCTTTTGTGTCGAAGATGTTTGCTGTGCCGGTTAAGATGGTGCCTGGACACAGTGGGGAGATTGGCAATGGTTATGGTGATGAAGGAGAGGGTGATTCGGATGAGTGTTTTCTGGCATTTGCTAGGATTTTTAGTGGGGTTTTGTATGCGGGGCAGAGGGTTTTTGTGCTTTCTGCTTTGTATGATCCGGTGAAAGGGGAATCAATGCAGAAGCATATACAGGAGGTTGAGTTGAAATCATTGTATTTGATGATGGGGCAAGGGTTGAAAGTGGTGAAGTCTGCCAAGGCAGGGAATGTTGTTGCCATTGCAGGTCTTGGGCAGCATATATTGAAGAGTGCTACTCTTTCTTCTACTAGGAACTGTTGGCCTTTTTCTAGCATGGCGTTCCAAGTTGCACCTACTTTGAGAGTTGCCATTGAGCCGTCTGACCCTGCTGATGTGGGTGCACTTCTCAAAGGGTTAAGGCTTCTGAATCGAGCAGATCCGTTTGTGGAGGTCACAGTGTCTGCAAGGGGAGAGCATGTGCTAGCGGCTGCTGGGGAAGTTCATCTCGAGAGATGCATAAAGGATTTAAAGGATAGGTTTGCAAAGGTAAGCTTGGAGGTGTCTCCGCCTCTTGTGTCCTACAAAGAAACCATTGAGGGAGATGTATTGAACGTGATGGAAAATTTGAAAGTTCTTAGCAGGAGATCGGATTATGTTGAAAAAACAACACCCAATGGAAGATGTGTTGTTCGGGTACAGGTGATGAAACTTCTACCTTCTCTGTCAAAGGTGCTCGATGAAAGCTCTCATTTACTTGGAGATATCATTGGAGTAAAGTCAGGACAGACAGTAAAATGTTTGGAAACCCAGAGACCGGGTATTGTTGAGAATGATAACCCAGTGGAAATGCTAAAAAAACGCATATTGGATGCTGTGGAGGGTGATATTTTGAGCAGGAATGAGAATGACAAGGACCATGCTGAGAAATGTAAACAGAAGTGGCTAAAGATTTTGAGGAGAATATGGGCTCTTGGGCCAAGACAGATTGGTCCTAACCTTCTCTTTACTCCTGATATTAAAGCAGAAAGTACTGATAGCTCTGTCTTAATAGATGGTTGTCCTTTTGTATCAGAAATGTTGGGCTTTGTGGCCGATTCTAGTACCACTGACGCGGTTGTTGAGTCGTCTCCAAATGCAAACCAAGCTTTGTACATGGATGCTGAGCACCTTGAGAGTAGTGTAATATCTGGATTCCAATTGGCCACTTCATCTGGACCCTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAGGCACGTATATCTCCATTTTCAGGGCAGCATGATGAATCTGAAGCACAGCAGCAATCTGAGCAATATGGAATCATTGCAGGGCAGGTAATTGCAACTGTCAAAGATGCTTGTAGAGCGGCTGTGCTTCAGAATAAGCCACGGCTTGTGGAAGCGATGTACTTTTGTGAATTGAATACACCTACTGAGCATTTGGGTCCTATGTATGCTGTACTTTCCCGAAGACGTGCCCGAGTTTTGAAGGAGGAGATGCAAGAAGGTTCCCCTTTCTTCACTGTGCATGCATATGTTCCTGTTTCCGAGAGCTTTGGTTTTGCGGATGAACTAAGAAGGTGGACTTCTGGCGCTGCAAGCGCACTTCTTGTCCTTAGCCACTGGGAAGCACTTCCTGAGGATCCTTTCTTTGTACCTAAAACAGATGAGGAACTTGAAGAGTTTGGAGATGGTTCTAGTGTTCTTCCAAACACGGCAAGAAAGTTAATTGATGCAGTCAGACGACGTAAGGGCCTTTCCGTGGAGGAAAAGGTGGTGCAGCATGGAACCAAGCAGAGAACACTGGCTCGTAAAGTCTGA 3063 0.5073 MEEGSSDCERERIRNICILAHVDHGKTTLADHLIAAAGGGVVHPKQAGRVRFMDYLDEEQRRAITMKSSSIRLRHCGHAVNLIDSPGHMDFCSEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWIERLTPCLVLNKLDRLITELKLSPSEAYTRLLRIVHEVNGIVSAFKSEKYLSDVDSLLAGAGTGAGETLDDYDDNEDVFQPQKGNVIFACALDGWGFGIREFAEIYASKLGASVSALLRALWGARFFNPKTKMIVGKKGAGANKKPMFVQFVLEPLWQVYQGALEGDKGLVGKVIRSFSLNVPPRELQNKDVRVVLQAVMSRWLPLSEAVLSMVVGCLPDPVAAQGFRISRLIPKRDVVEEGAAAAAEAELVRKAVEVCDCRDGVPCVAFVSKMFAVPVKMVPGHSGEIGNGYGDEGEGDSDECFLAFARIFSGVLYAGQRVFVLSALYDPVKGESMQKHIQEVELKSLYLMMGQGLKVVKSAKAGNVVAIAGLGQHILKSATLSSTRNCWPFSSMAFQVAPTLRVAIEPSDPADVGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKDRFAKVSLEVSPPLVSYKETIEGDVLNVMENLKVLSRRSDYVEKTTPNGRCVVRVQVMKLLPSLSKVLDESSHLLGDIIGVKSGQTVKCLETQRPGIVENDNPVEMLKKRILDAVEGDILSRNENDKDHAEKCKQKWLKILRRIWALGPRQIGPNLLFTPDIKAESTDSSVLIDGCPFVSEMLGFVADSSTTDAVVESSPNANQALYMDAEHLESSVISGFQLATSSGPLCDEPMWGLAFVIEARISPFSGQHDESEAQQQSEQYGIIAGQVIATVKDACRAAVLQNKPRLVEAMYFCELNTPTEHLGPMYAVLSRRRARVLKEEMQEGSPFFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTDEELEEFGDGSSVLPNTARKLIDAVRRRKGLSVEEKVVQHGTKQRTLARKV 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00287 1020 Pfam Elongation factor Tu GTP binding domain 12 243 IPR000795 GO:0003924|GO:0005525
Pste8g00287 1020 CDD aeEF2_snRNP_like_IV 600 885 - -
Pste8g00287 1020 Gene3D Yeast translation eEF2 (G' domain) 226 331 - -
Pste8g00287 1020 CDD EF2_II 393 514 - -
Pste8g00287 1020 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 11 241 IPR000795 GO:0003924|GO:0005525
Pste8g00287 1020 FunFam Elongation factor like GTPase 1 877 1012 - -
Pste8g00287 1020 Gene3D - 624 875 IPR014721 -
Pste8g00287 1020 FunFam Elongation factor like GTPase 1 226 331 - -
Pste8g00287 1020 SUPERFAMILY EF-G C-terminal domain-like 527 601 IPR035647 -
Pste8g00287 1020 SUPERFAMILY Translation proteins 380 523 IPR009000 -
Pste8g00287 1020 CDD EF2_snRNP_III 529 600 - -
Pste8g00287 1020 PRINTS GTP-binding elongation factor signature 133 142 IPR000795 GO:0003924|GO:0005525
Pste8g00287 1020 PRINTS GTP-binding elongation factor signature 97 108 IPR000795 GO:0003924|GO:0005525
Pste8g00287 1020 PRINTS GTP-binding elongation factor signature 15 28 IPR000795 GO:0003924|GO:0005525
Pste8g00287 1020 PRINTS GTP-binding elongation factor signature 61 69 IPR000795 GO:0003924|GO:0005525
Pste8g00287 1020 PRINTS GTP-binding elongation factor signature 81 91 IPR000795 GO:0003924|GO:0005525
Pste8g00287 1020 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 10 1019 - -
Pste8g00287 1020 Pfam Elongation factor G C-terminus 879 963 IPR000640 -
Pste8g00287 1020 FunFam Translation elongation factor 2 528 604 - -
Pste8g00287 1020 Gene3D Elongation Factor G (Translational Gtpase), domain 3 528 604 - -
Pste8g00287 1020 FunFam Elongation factor 2-like protein 4 214 - -
Pste8g00287 1020 Gene3D - 877 1011 - -
Pste8g00287 1020 SMART EFG_C_a 878 967 IPR000640 -
Pste8g00287 1020 Gene3D - 5 205 IPR027417 -
Pste8g00287 1020 SUPERFAMILY EF-G C-terminal domain-like 881 979 IPR035647 -
Pste8g00287 1020 CDD EF2 14 234 - -
Pste8g00287 1020 Gene3D Translation factors 348 526 - -
Pste8g00287 1020 CDD eEF2_snRNP_like_C 881 960 - -
Pste8g00287 1020 SUPERFAMILY Ribosomal protein S5 domain 2-like 603 880 IPR020568 -
Pste8g00287 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 346 IPR027417 -
Pste8g00287 1020 Pfam Elongation factor Tu domain 2 433 511 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00287 Pste-Chr8 1579847 1582909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00287 7 1020 Eukaryotic Initiation Factors Gene Family AT3G22980 69.718 0.0 1445