Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00283 ATTCAAAGGGCGAAGGGAGTGAGGAGCAGAAGCAGAAAGTGGAAGGTGGGAGTGAAAGTCTAACAGTGGCCATAGCGTGCGTGCAAAGGATGATACGCAAGGTTGTTCCGAGTCATGCAAAAGTGAGGGAGGAAGCAAAGGCAATGATGCTTCATCACCAGGGCCATTGCCATGAGGAGCAAAGAAGGACTTTCACTGCTGAGGACCTCATATATGCCATGGCCAAGTTAGGTTTTGATAACTATGCTCACCTTCTCACCCTTTACATCCATCGCTATCGTCAAGCTGTGCCAAATCATGCTGCTGCTTTCATTGATATCCCTCCAAATCCAAAGTCTGCCTTTTATATTCATGCCTTCTCAACTGCTGCTTCTGCCAACCTTTACTATGATCATCACCATCCTTCTTACTTTAATCCTCCCAACAACTCCTTCGCTAAC 440 0.4659 MIRKVVPSHAKVREEAKAMMLHHQGHCHEEQRRTFTAEDLIYAMAKLGFDNYAHLLTLYIHRYRQAVPNHAAAFIDIPPNPKSAFYIHAFSTAASANLYYDHHHPSYFNPPNNSFAN 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00283 117 PRINTS CCAAT-binding transcription factor subunit A signature 27 45 - -
Pste8g00283 117 PRINTS CCAAT-binding transcription factor subunit A signature 46 64 - -
Pste8g00283 117 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 68 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pste8g00283 117 Gene3D Histone, subunit A 1 73 IPR009072 GO:0046982
Pste8g00283 117 SUPERFAMILY Histone-fold 1 70 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00283 Pste-Chr8 1558581 1559046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00283 1 116 CCAAT-HAP3 Transcription Factor Family AT1G21970 32.031 5.78e-20 79.7