Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00281 ATGAAGATGAAGATGTTGATGTTGATGTTGTGGGAGGTTATGAGAGTGGGAGCAGAGAAAGAGAGAGTGGAAGTGAGGTTGGAGTTCCCCTCTTTCAGTTTCACTGTGGGGGATTCGTCTCTAAGGAATGGGGGCCTCGTAAGAATGAGTAATTTCAAAGGAGAAGGAGGCGGTGGAGCAGTGGTGTACATCCACCCCATCTCCCTCCTCCACTCGTCCTTCTCTACAGTGTTCTCCTTCAACAGCTCCTCACTGTCCTTCTTCATTTCCCCCAGCAACGCCGTCCCCTCCTCCGCCTTGGTGGCCGTGGAGTTCGACAGCATCCACAACCAGGTGGGCTTCCATGTGGACTCCACGAGCTCTCTGAAAAGAGCTGACCTCAAGAGCGGCAACAGCATCAGTTCATGGATCGACTACAGCAGCCCTGAGTCCATGGTTAACGTGTTCATGTCCTATTCTCATTCGAAACCCCTCCACCCCCTCCTCTCTCTCAACTTCGATCTCTCTCCTCACCTCACACACCCCGTCTACCTCGGCTTCTCCTCTTCCACTCCCGCTACCTCCCACATCCTACGTTGGACCTTTCACTCTTCCTTTCTTCCCCCCAACAACCACCCCCACTTTCACATCCTTCCTCTCCCTCTCGCTCTCGCTGTTTCTTTCTTTCTCGCTTTCTCTTTCTTGGCTTTTCTTTTTATCCGTCGTTCCACCCACCCAAACCCAACCCACAACTTTGAGAGCACTTTTCTGTCCTGTCCCAGGGCCTTTCCTTACAAAGACTTGAATTCTGCAACAAGAGCATTTCACCCCAGTAGGATCGTCGGCCATGGATCTTTCGGCACCGTCTACAAGGCTTTCTTTTTGTCTTCCGGTACCATTGCTGCTGTCAAAAGGTCTCGCCACTCTCACCAAGGCAAGACTGAGTTTCTTGCTGAACTCTCCATCATAGCTGGCCTGCGCCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGTGTTGAGAAGGGGGAGTTGCTGCTTGTCTATGACTTCATGCCCAATGGAAGCTTGGACAAGATGCTTTACAAGGAACCTGATCGAGGAAGACTGTTGACTTGGTCTCACAGGCAAAACATTGCTCTGGGCTTGGCTTCTGTGCTCCTCTACCTTCACCAAGAGTGTGAACAGAGAGTCATTCATAGGGACATTAAGGCTGCCAACATATTGCTCGATGGAAACTTCAACCCAAGGTTGGGGGATTTTGGATTGGCCAAGCTCATGGATCATGATGAGAGTCCCGTTTCCACTCTCACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAGTATGGGAAGGCCACTGATAAGACTGATGTTTTCAGCTATGGGGTGGTTGTGCTTGAGGTGGCTTGTGGGCGGAGGCCAATTGAAAGACACGGCTCCAAAATGGTGAATCTCGTTGACTGGGTTTGGGAGCTGCACTCTCAAGGGAAGCTCATCGATGCTGCTGACAAGAGATTGAATGGGGAGTTTCAAGACCAGGAAATGACCAAGCTCTTGCTCTTGGGCTTGAGCTGTGCTAATCCTGATAGTGCCGAGAGGCCTTCCATGAGAAGAGTGCTTCAGATTCTCAACAATGAGGCTACACTTGTTGTGCCAAAACTTAAGCCAACCCTCACCTTCTCTACTCCCCTGCCTCTCACTATTGAGGACATTGTTTCCGATGCTCAAGAGTTCAACACCAGTCACTCTATTTGCGAGATCAAAATTCACTGA 1758 0.504 MKMKMLMLMLWEVMRVGAEKERVEVRLEFPSFSFTVGDSSLRNGGLVRMSNFKGEGGGGAVVYIHPISLLHSSFSTVFSFNSSSLSFFISPSNAVPSSALVAVEFDSIHNQVGFHVDSTSSLKRADLKSGNSISSWIDYSSPESMVNVFMSYSHSKPLHPLLSLNFDLSPHLTHPVYLGFSSSTPATSHILRWTFHSSFLPPNNHPHFHILPLPLALAVSFFLAFSFLAFLFIRRSTHPNPTHNFESTFLSCPRAFPYKDLNSATRAFHPSRIVGHGSFGTVYKAFFLSSGTIAAVKRSRHSHQGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPDRGRLLTWSHRQNIALGLASVLLYLHQECEQRVIHRDIKAANILLDGNFNPRLGDFGLAKLMDHDESPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGRRPIERHGSKMVNLVDWVWELHSQGKLIDAADKRLNGEFQDQEMTKLLLLGLSCANPDSAERPSMRRVLQILNNEATLVVPKLKPTLTFSTPLPLTIEDIVSDAQEFNTSHSICEIKIH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00281 585 CDD STKc_IRAK 274 540 - -
Pste8g00281 585 Gene3D Transferase(Phosphotransferase) domain 1 344 547 - -
Pste8g00281 585 SMART serkin_6 268 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00281 585 ProSitePatterns Protein kinases ATP-binding region signature. 274 297 IPR017441 GO:0005524
Pste8g00281 585 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 209 IPR013320 -
Pste8g00281 585 Pfam Legume lectin domain 83 202 IPR001220 GO:0030246
Pste8g00281 585 Gene3D - 28 199 - -
Pste8g00281 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Pste8g00281 585 PANTHER - 50 547 - -
Pste8g00281 585 Gene3D Phosphorylase Kinase; domain 1 233 343 - -
Pste8g00281 585 FunFam L-type lectin-domain containing receptor kinase VIII.1 344 555 - -
Pste8g00281 585 ProSitePatterns Legume lectins beta-chain signature. 101 107 IPR019825 -
Pste8g00281 585 SUPERFAMILY Protein kinase-like (PK-like) 251 558 IPR011009 -
Pste8g00281 585 Pfam Protein kinase domain 269 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00281 585 ProSiteProfiles Protein kinase domain profile. 268 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00281 Pste-Chr8 1550319 1552076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00281 27 572 Receptor kinase-like Gene Family AT5G55830 49.922 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g00281 Pkinase 1.6e-49 CL0016