Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00254 TACTTGGCTTCAGTCAAGTTCTAATTAGCATATCCAAGAGATCATGGAGAATGAAAGAGAAGAAGAGATTGAGGACATGTCAATGTCACCCCCATCTCTGGGCTCTATGCAGATTGCTGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCGAACATGTACTCTGAGATTGAAATAAAAGTTGAGGATTCCACTTTCAACCAAGATCCCCCCCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTTTAAGGTGAGAGATAGTCAAGCTGCTTACAATAACCCTGTGAAAACAATGATGTCAAAAGTAGCCACACAACACCACGTGGAGGAACATAGATACAAGAAAATTTTGGAGGGTATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAGACAACGTTGTTGAGAGTTGTAGGGGGAAGATTAATTGACAATGTAAAGGGGAAGATAACTTATAACGATGTTCGATTTAATCCGGCTGTCAAGAGGAGGATTGGATTTGTGTCACAAGAAGATGTTCTTTTCCCACAACTTACAGTGGAGGAAACATTAATCTTCTCTGCATTCTTAAGGCTGCCAACCAATATGAGCAAGCAACAAAAATATGCAAGAGTGGAGAATACTGTCATGGACCTAGGTCTTGAAAGATGTCGCCACACAAAAATAGGCGGAGGATATCTCAAAGGCATATCCGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTGCTACTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCTAATAGACTCCTTCTCACTCTTCAAGGGCTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCGTCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTACCCAGTTTACTATGGGAGGGCTAAAGATTCAATGCAGTACTTTTCATCCTTGAGGTTCATCCCGGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGTGTTCCAGAAGATAATTTGAAAGATCAAGAATCTACTGACTCTTCAAAAGCTGTTATCAAATATCTACAACACAAGTACAAAGACACATTAGAGCGAAAAGAAAAAGAAGAGAATCATGGAGCAGCAAACACACCAGAACATCTTCAGCTAGCCATTCAAGTTAAAAAGGACTGGACAGTGAGTTGGTTGGATCAATTCGTTATTCTTTATAAGAGAACATTCAGAGCGAGGTGCAAGGATTATTTTGATAAATTAAGACTACTTCAAGCACTTGGCATTGCACTTTTGCTGGGGTTACTTTGGTGGAAATCCTCTACCAATACAGAGGCCGAAGTTAGAGATCAGGTTGGTCTAATGTTCTATATCTGTATATTCTGGACATCTTCGTGTATTTTTGGAGCAGTCTACGTGTTTCCATTTGAAAAGGTCTATTTGGTGAAAGAAAGGAAAGCAGACATGTATAGACTGAGTGTATACTATGCAAGCAGCACTCTGTGTGACATGGTGGCACATGTTTTCTACCCTACTTTTTTCATGCTAATCTTGTACTTTATGGCCGGATTTAAGAGGACTGTTGCTTGCTTCTTCCTGACTTTGTTTGCTGTGTTATTAATAGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATGGTTGCATCTTTGATACTGATGTTATTCCTTCTCACAGGTGGATACTATGTCCAGCACGTACCGAAGGTGATGCAATGGTTGAAGTATTTGTCATTCGTGTACTATGGGTTCAGGCTTCTTCTAAAAGTGCAGTATTCAGGAGACCAACCATACGAGTGTGAAAGGGAAGGAGGGTGCAGGACACTGCAGAGTTCACCATCATTTGACACTGTAAACTTGGAAGGAGGCTTAACTGAAGCATGGGTTCTGGTAGCCATGGCTTTAAGCTTCCGCGTTTTTGCTTACTTCTGTCTCCGAAGACGAATTGACGTTTGCAATTAGTTTCTCTTCTCTGCTCTTGCCTCTTGCTAACTAAACACCAACATTTCACAATAAATAAATACCTCTACCATTTTGAAGAAATGTACTTCATAGATGAGTTATATTATGTATTTTGCGG 2222 0.4145 MENEREEEIEDMSMSPPSLGSMQIAGSNGFGHSMEFMSQAYLPNMYSEIEIKVEDSTFNQDPPLPIYLKFEDVEFKVRDSQAAYNNPVKTMMSKVATQHHVEEHRYKKILEGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLIDNVKGKITYNDVRFNPAVKRRIGFVSQEDVLFPQLTVEETLIFSAFLRLPTNMSKQQKYARVENTVMDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGRAKDSMQYFSSLRFIPEIPMNPAEFLLDLATGQVNNISVPEDNLKDQESTDSSKAVIKYLQHKYKDTLERKEKEENHGAANTPEHLQLAIQVKKDWTVSWLDQFVILYKRTFRARCKDYFDKLRLLQALGIALLLGLLWWKSSTNTEAEVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYASSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHVPKVMQWLKYLSFVYYGFRLLLKVQYSGDQPYECEREGGCRTLQSSPSFDTVNLEGGLTEAWVLVAMALSFRVFAYFCLRRRIDVCN 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00254 686 Gene3D - 95 327 IPR027417 -
Pste8g00254 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 332 IPR003439 GO:0005524
Pste8g00254 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 325 IPR027417 -
Pste8g00254 686 SMART AAA_5 119 310 IPR003593 GO:0016887
Pste8g00254 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 673 - -
Pste8g00254 686 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Pste8g00254 686 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Pste8g00254 686 FunFam ABC transporter G family member 22 97 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00254 Pste-Chr8 1412151 1415534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00254 108 293 Calmodulin-binding Proteins AT2G36910 30.890 2.79e-13 71.6