Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00251 ATGGCTAGTGTTGTTGATTCTTCTTCAGCTTATCATAATCACTCTTCATTTTCCAGTGATGATTGTAAGATGTACAAAGGAGTGAGGAAGAGAAAATGGGGGAAATGGGTATCTGAAATTAGGCTTCCCAATAGCCGTGAACGCATATGGTTGGGGTCTTATGATACTCAAGAGAAAGCAGCAAGGGCTTTTGATGCTGCACTTTTCTGCTTACGTGGCAGAAGTGCAAGTTTCAATTTCCCTGACACTCCTCAACACTTGTTGGACTTCACTTTGGTGGTGCCACAAACCCTCTCCCACCAAGAAATTCAAGAGGTAGCAGCAAAATTTGCCAACAAAGAGACCAATAATGGTAATGATAACAATAATAATACTACTTCTTCTTCTGATTCTCATGAGTTAGAGTCATCACAAACAAGTGATGAGACTAAGTCCAACAACAATACAAGGTTGATGAATAATGGTGTGAGTGTGACTCATGATGATGTGCAAATGGACCAACAAGGAAATTCGGACACCACTGATTGGACATTTTTTAACACGTTGGATGACTTGAATGGCTCTGATTATGGCCTCTATTTTGGGCCAGACAAGATCATGCACCCGGGTGAGTTCTTGTGTCCCACTCAAGTTCCATTTTTTCATCAATTTGATGATCAAGCTGATGATGATGATGATCATGATGCTTTTTCTAACCATTCGTTCCTCTGGAGTTGGAACTTTTGA 726 0.4063 MASVVDSSSAYHNHSSFSSDDCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALFCLRGRSASFNFPDTPQHLLDFTLVVPQTLSHQEIQEVAAKFANKETNNGNDNNNNTTSSSDSHELESSQTSDETKSNNNTRLMNNGVSVTHDDVQMDQQGNSDTTDWTFFNTLDDLNGSDYGLYFGPDKIMHPGEFLCPTQVPFFHQFDDQADDDDDHDAFSNHSFLWSWNF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00251 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 218 - -
Pste8g00251 241 MobiDBLite consensus disorder prediction 111 153 - -
Pste8g00251 241 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Pste8g00251 241 Pfam AP2 domain 25 73 IPR001471 GO:0003700|GO:0006355
Pste8g00251 241 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Pste8g00251 241 CDD AP2 25 83 IPR001471 GO:0003700|GO:0006355
Pste8g00251 241 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Pste8g00251 241 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Pste8g00251 241 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Pste8g00251 241 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Pste8g00251 241 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00251 Pste-Chr8 1384039 1384764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00251 25 112 AP2-EREBP Transcription Factor Family AT1G19210 72.727 1.23e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste8g00251 AP2 3e-12 CL0081