Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00237 ATATAAGCCTCCTCTTCTCATTTTTGAACAACGTTCATCATTCATCAAATCCACCACAACCCTGCTTCTGCCTCAGATCCGATCTTCACACTCGACCTTCAGTTTCACATTTTCTTTAATTAATGTGGGAAAACATGCCACCGGAAACCTTACCAAACTCAAATTTTATATCTCCTCATAAGAGAGGACTCAATTTGAAAGGTTCTGTATGTAACAACAGTGAAGCTTCCTACACTGTAACGGATGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAGGCAGCTTCAAGGAGATACGAAGCAGCAGAATGGCTTGGGAAGATGGAGAACGGAGCATGTTCGTGGGTGTTGAAAGAAGCCTCGGAAGAGGAATTCTGCCTCGCACTCCGTAACGGTCTCATTCTCTGCAATGTCCTGAACAGAGTAAACCCGGGCGCTGTGGTAAAAGTTGTGGACAATGCCGTGGACAATCTTGCCCTTCAGTCCGCGGAGGGACCCGCTCAATCTGCAATTCAGTATTTCGAGAACATGCGCAACTTTCTCCAAGCGGTCAACAACATGAAGCTTTTGACTTTCGAAGCTTCCGATTTGGAAAAGGGGGGTTCCTCCAGCAAAGTTGTGGATTGCATTCTCTGTTTGAAAGGGTACTATGAATGGAAACTGTCGGGAGGAGTTGGGGTGTGGAGGTATGGTGGAACTGTCAGGATTACTTCCTTCCCCAAATGGTCTCCTTCCAACATACTCGACACTGAAAGTATTCTTGACCACTCTGACTCATCACTGTTTCTTAATCATCTGTCTGGAGATGTTTCTGTTGAAGAAACCAAAGCTGCTAATGCTTTGGCTTCCTTTTTTTATCAGTTTGGACTCAACCTTCTTCTGGCTTACCTCACCGAGGCTGATGATCTGCCTTTGAATGCAATGGTAATTGATACTTTGCTCAGGAAGGTCGTCAAGGATTTTTCTTCATTGCTTGATTCGCAAGGCACTCAGCTTTGCCATTTCCTCAATAAGATATTGAAGGCTGATACTGGTTGCCTCTCTAAGAGAGAATTCATAGAAGCTGTCACGTTGTATATTAATCAGAGGCGTAGTTTGGCATCAAATGAATTCTCTAAACTATGCACTTGCGGTAGAAAATGGGATGGTAATCAGCCCAACGTCAATTATTCTGCCAAACATGGCGAAATAATTGACGCCCAGCAAAAAGAGATAGAGAGACTGAAGTACTTCTATGAAGAGATACAATTGGAGGTCAAACAAATTCAATCTAAGTGGGACGCAGAATCAAGAAGGCTTGAGAATCATATAAAGGAGGCCTCCTCTTCCTACCACAAAGTTTTAGAAGAGAATCGCTCTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGGCCCTTCTTACCAGGACAAGCAAATGGACAATCTACTGTAGATTATATAGGACAAAATGGAAACATAATGATTATGAATCCCCTAAAGCAAGGAAAAGATGCTAGAAGAGTATTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAACAAATATATGATGACACTCAACCATTGGTTAGGTCCGCCTTAGATGGCTACAATGTATGCATCTTTGCATATGGACAGACTGGGTCAGGAAAGACATACACAATGAGTGGCCCTGATCTGATGACAGAAGAAACATGGGGTGTAAACTATAGGGCATTGCGTGACTTATTTCATATTTCAAAGGAAAGAGCAGAAGCCATAAAATATGAAGTTGGCGTTCAGATGATTGAAATATACAATGAGCAAGTGAGAGATTTATTAGTTAATATACGAAACAACTCTCAATTAAATGGTCTTAATGTGCCTGATGCATCTTTAGTTCCAGTTAATTGTACTCAAGATGTTCTTGATTTAATGAAAATTGGTCAGAAGAATCGTGCTGTTGGTGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCTCATAGTGTATTGACAGTTCATGTCAGAGGGAGGGACTTAGTGTCTAACTCCATTCTTAAGGGTTGTCTCCATCTAGTGGATTTGGCTGGAAGTGAGAGAGTGGATAAATCTGAGGCTGTTGGCGAGAGACTAAAGGAGGCCCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATCTCTGCTTTGGCACAAAAGAGTCCACATATTCCTTATAGAAATAGCAAGCTGACACAAGTTCTACAAGATTCATTAGGCGGCCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTAAATGCCCTTGGAGAAACAATAAGCACGCTGAAGTTTGCAGAGAGGGTTGCTACCATTGAACTTGGGGCCGCTCAATCTAATAAAGAAACTGGTGAAATTCGGGAGCTAAAGGAAGAGATATCAAATATCAAATCAGCTTTGGAGAGGAAAGAAACTGAACTACAGCAATGGAAATCTGGGATTGCACGAAATGCCATAGAATCTCAGAAAGCATCAAGAGCTGTTTCACCTTTCCGTTTGCCCAAAAATGGTACTAGTGACAGCATGAAGCCTGAAAATTGTCAAAGATCCATGGATGACAGAAGCTCTGAGGCTAAAACATGTTCTTTGGGTAAGCAGAGAAGATTTCCCTCAACATTTATAGAAAGGGACTCCATGCTAAAAATGTCTCTTCTGGTTGAAGAAAAACCGGTGAGCTCAGGGAAAGGTAGATCACCATCACCTCCTGTCAGAAGGAGATCAATATCTACTGATAGAGGGTCTGTTATTAAAAGCAAGGTCAAAAGTGATACATCAGACAACCAACCAATCTTAAAGCATCCATTTCCAACTAGAGTACTAGTAAATAAACCTCTTGTCACAATGCCAATGGCCTCATCCATAGACAATAACTCAAGGGTGAATCTGAATTCACTGGAGTCAGTGAAGCAGGATAACACTTCTGAAACTCTTGTCAACTTACAGAAGGTAAACACCAGGAAAGTTCATCAAGAACATGAAGAGGAACAATTCAAGCAAGCTCTTGGTGCAGTAAGACAAGGTGGTAGGAAAAACAAGGCTGACGGTAAGGCCAAGGTTAAGCATCATCAACAATTGCCCTTTAGGATTCGAAAGGCTGGTATGATACCTATTTCCCGCATGGAAATTGCGGGCCAAATGACCATGGAGGCTCCTCGAAAGAACAACTACTTTGAGCCGGAAAATGATATAAGCTTCATGGAGTCTGCAGTCAACGGTGTTGTAAATCTTAAAAAGATACATCAGAACATCTCCGGGAATTCTCAGAACCTTGGATCAAGAGGGATAGTGCAAGCAGCTGAGCTTTTATTGTCCAGCAAAGTTGAGAACAAAATTTTACAACATGGTTCAGGTCGCAATCTTAAGGAGGGCACCAATACTACATTGCCTGAACATAGAAGAAGTCGATCTACTCCACGAGGAAAGTTTTTTGTTTTATCTTGAGGATTTCAGGTTAAAGTTATATTTTTTTATATTATTTATTTTTGTACAGTGAAAACTATCGATGTGCATGTTGGAGTGCCTGCTAACATAGTTTTATCAATTGAGGTCCGTTTATGCGACCTTCCGGTGTTCGTATTCTGATTAAGCAGCTCCATTGTAATCTAAATTTTCTGATGTCAGTATACTTCTGAAATCTTGAGGAGTTATTCTACAATACATAATCTTA 3714 0.4122 MWENMPPETLPNSNFISPHKRGLNLKGSVCNNSEASYTVTDESINDHELAQRKAEEAASRRYEAAEWLGKMENGACSWVLKEASEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVDNLALQSAEGPAQSAIQYFENMRNFLQAVNNMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSPSNILDTESILDHSDSSLFLNHLSGDVSVEETKAANALASFFYQFGLNLLLAYLTEADDLPLNAMVIDTLLRKVVKDFSSLLDSQGTQLCHFLNKILKADTGCLSKREFIEAVTLYINQRRSLASNEFSKLCTCGRKWDGNQPNVNYSAKHGEIIDAQQKEIERLKYFYEEIQLEVKQIQSKWDAESRRLENHIKEASSSYHKVLEENRSLYNQVQDLKGAIRVYCRVRPFLPGQANGQSTVDYIGQNGNIMIMNPLKQGKDARRVFSFNKVFATSATQEQIYDDTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERAEAIKYEVGVQMIEIYNEQVRDLLVNIRNNSQLNGLNVPDASLVPVNCTQDVLDLMKIGQKNRAVGATALNERSSRSHSVLTVHVRGRDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVATIELGAAQSNKETGEIRELKEEISNIKSALERKETELQQWKSGIARNAIESQKASRAVSPFRLPKNGTSDSMKPENCQRSMDDRSSEAKTCSLGKQRRFPSTFIERDSMLKMSLLVEEKPVSSGKGRSPSPPVRRRSISTDRGSVIKSKVKSDTSDNQPILKHPFPTRVLVNKPLVTMPMASSIDNNSRVNLNSLESVKQDNTSETLVNLQKVNTRKVHQEHEEEQFKQALGAVRQGGRKNKADGKAKVKHHQQLPFRIRKAGMIPISRMEIAGQMTMEAPRKNNYFEPENDISFMESAVNGVVNLKKIHQNISGNSQNLGSRGIVQAAELLLSSKVENKILQHGSGRNLKEGTNTTLPEHRRSRSTPRGKFFVLS 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00237 1121 CDD CH_AtKIN14-like 60 177 - -
Pste8g00237 1121 SMART ch_5 60 179 IPR001715 GO:0005515
Pste8g00237 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 428 784 IPR027417 -
Pste8g00237 1121 MobiDBLite consensus disorder prediction 1089 1121 - -
Pste8g00237 1121 FunFam kinesin-like protein KIN-14F 422 788 - -
Pste8g00237 1121 Gene3D - 44 190 IPR036872 -
Pste8g00237 1121 SMART kinesin_4 425 755 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00237 1121 MobiDBLite consensus disorder prediction 796 838 - -
Pste8g00237 1121 FunFam kinesin-like protein KIN-14F 50 181 - -
Pste8g00237 1121 Gene3D Kinesin motor domain 371 749 IPR036961 -
Pste8g00237 1121 MobiDBLite consensus disorder prediction 862 906 - -
Pste8g00237 1121 ProSiteProfiles Kinesin motor domain profile. 427 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00237 1121 PANTHER KINESIN-LIKE PROTEIN KLP-3 65 902 IPR027640 GO:0003777|GO:0007018
Pste8g00237 1121 MobiDBLite consensus disorder prediction 821 836 - -
Pste8g00237 1121 Coils Coil 754 781 - -
Pste8g00237 1121 Pfam Calponin homology (CH) domain 61 181 IPR001715 GO:0005515
Pste8g00237 1121 Pfam Kinesin motor domain 433 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00237 1121 PRINTS Kinesin heavy chain signature 697 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00237 1121 PRINTS Kinesin heavy chain signature 648 666 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00237 1121 PRINTS Kinesin heavy chain signature 502 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00237 1121 PRINTS Kinesin heavy chain signature 617 634 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste8g00237 1121 SUPERFAMILY Calponin-homology domain, CH-domain 52 209 IPR036872 -
Pste8g00237 1121 CDD KISc_C_terminal 425 749 - -
Pste8g00237 1121 ProSiteProfiles Calponin homology (CH) domain profile. 58 181 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00237 Pste-Chr8 1310389 1319786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00237 366 747 Calmodulin-binding Proteins AT5G65930 41.103 1.20e-75 271