Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00233 GAAAATGTTGGCGTGGATCTCTTTGTGTTTATAGGTGAACCGACGTGAGTATATATATAAGCAGAAAAAAGGTTAAAAAGGCAGGCAGCGGTTGAGAGTGATAATGATACTGATTGATATAATATATTCCCTCTGGTTCGGTTGGCTGGGCTCCTCTCTCTTGATACAATTCAATTCTGAGTTCACCAGTACAATGTCTGCGTTGGAACTCAACCACTTTCAATTTATCTGTTTCTTTGCACTACGCACGCATGCTGATGATAACATCATCGGAATCGGATCGGACCGGACTATTTCATACATCATGGCCTGGGCTCCTTTCCCTATGGGTACTAACTCAGTTGTGCATTTACTGGACTCTTCATCTGAGCTTCACTTTTCTGGATTTCACATGGATGGCTTAGACCAAAGAAAGGCTGCCACAGAGCAACCATCTACTTCAGCAACTGACATGTATAAACAACCGTTTGTGATAGGTGTTGCTGGTGGATCAGCATCTGGTAAGACATCAGTTTGTGATATGATTGTTCAGCAGCTTCATGACCAACGGGTTGTACTTGTTAATCAGGATTCTTTTTACCATAATTTGACTGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGATCATCCTGAAGCTTTTGACACTGAGCAATTGCTATGTATCATGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATTCCAAAGTATGACTTTAAGGGTTACAAGAATGATGTTTTTCCAGCAAGACGGGTAAGCCCAGCAGACGTTATTATTTTGGAAGGTATACTTGTTTTTCATGATCCACGAGTGCGGGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCTAGAAGAATTAAGCGAGATACTGCTGACAATGCTCGTGATATTGGATCTGTGCTTGATCAGTATTCTAAATTCGTGAAGCCAGCTTTTGATGACTTTATTCTTCCCACCAAGAAGTATGCTGATATCATTATTCCCCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTACAGCATATTTGCACGAAGCTTGGTCAGCATGACTTGTGTAAAATATATTGTAACTTATATGTCATTCACTCTACTTTTCAGATACGGGGTATGCATACCCTGATACGCGATTCTCAAACAACAAAACATGACTTTGTATTTTATTCTGATCGTTTGATTCGTTTGGTTGTAGAACATGGCCTAGGGCATCTTCCATTTACAGAAAAGCAAGTAATCACTCCCACTGGATCCATATACAGTGGCGTGGATTTCTGTAAGAGGCTGTGTGGTGTCTCTATCATTCGGAGTGGGGAGAGTATGGAAAATGCTTTACGAGCATGCTGCAAAGGTATCAAGATTGGAAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAACAGCTAATATACGAGAAGTTGCCTAGTGATATCTCAGATAGGCATGTATTACTACTGGATCCTATCTTAGGCACAGGTAATTCGGCTATTCAAGCAATTTCTTTACTTTTAAAGAAGGGTGTACCAGAATCCAACATTATATTCCTCAATCTCATATCAGCACCTCAAGGTGTTCATGTCGTCTGCAAAAGCTTCCCGAGAATAAAAATCGTGACGTCTGAGATTGAAATTGGTTTGAATGAAGATTTCCGTGTCATACCTGGCATGGGTGAGTTTGGAGATCGATACTTTGGAACAGATGATGATGACCAGCAAGTGGTGCCCTCTTCACAGTAGACTTGGGTGAAATTCACATTTTTTTTTGTTTGATCATCTCTTTAATAAGACTTTGCTGGGCTGAGTTCTTGTTCTAAATCAATTTTGATAATTTTGTTTTACAGTCAGATTCTTGGTATACTCCAATGCAAATTTTGCTTTAACTTTTATTATAT 1917 0.3965 MILIDIIYSLWFGWLGSSLLIQFNSEFTSTMSALELNHFQFICFFALRTHADDNIIGIGSDRTISYIMAWAPFPMGTNSVVHLLDSSSELHFSGFHMDGLDQRKAATEQPSTSATDMYKQPFVIGVAGGSASGKTSVCDMIVQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPEAFDTEQLLCIMDKLKRGQAVDIPKYDFKGYKNDVFPARRVSPADVIILEGILVFHDPRVRALMNMKIFVDTDADVRLARRIKRDTADNARDIGSVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHICTKLGQHDLCKIYCNLYVIHSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPSDISDRHVLLLDPILGTGNSAIQAISLLLKKGVPESNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDDQQVVPSSQ 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00233 552 CDD UMPK 123 318 IPR000764 -
Pste8g00233 552 Gene3D - 325 540 IPR029057 -
Pste8g00233 552 FunFam Uridine kinase 325 540 - -
Pste8g00233 552 NCBIfam uridine kinase 120 321 IPR000764 -
Pste8g00233 552 CDD PRTases_typeI 398 513 IPR000836 -
Pste8g00233 552 Gene3D - 117 324 IPR027417 -
Pste8g00233 552 Pfam Uracil phosphoribosyltransferase 339 540 - -
Pste8g00233 552 PRINTS Uridine kinase signature 151 162 - -
Pste8g00233 552 PRINTS Uridine kinase signature 196 211 - -
Pste8g00233 552 PRINTS Uridine kinase signature 267 278 - -
Pste8g00233 552 PRINTS Uridine kinase signature 289 302 - -
Pste8g00233 552 PRINTS Uridine kinase signature 121 138 - -
Pste8g00233 552 PRINTS Uridine kinase signature 253 263 - -
Pste8g00233 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 314 IPR027417 -
Pste8g00233 552 FunFam Uridine kinase 118 324 - -
Pste8g00233 552 SUPERFAMILY PRTase-like 324 541 IPR029057 -
Pste8g00233 552 PANTHER URIDINE KINASE 107 451 - -
Pste8g00233 552 Pfam Phosphoribulokinase / Uridine kinase family 123 309 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00233 Pste-Chr8 1275256 1283358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00233 75 543 PRT Gene Family AT4G26510 83.087 0.0 817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00233 8 1275256 1283358 Pste8g00233 8 1275256 1283358 ECH
Pste7g01503 7 13764034 13772245 Pste8g00233 8 1275256 1283358 PCT