Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00227 ATGCCAGGAAGCCTAAATGTGACAGGCCTCAGCGGCGCTGCCCTACCTCCAGTTAGGGTATCCGTTCGGGCGCGAGCGGCGAGCCTCTACGAGGTGCTCCGGATAAAGCAGAACGCTTCAGCGGTGGAGATAAAGTCCGCATACCGGAACCTTGCGAAGGCGTATCACCCTGATTCGGCGGTCCGGCCATCGGAATCGGACGAACGAGACTTCATCGAGATTCACGAGGCCTACGCCACGCTGTCGGATCCCTCAGCGAGATCACTTTATGATCTTTCCTTTCCTTGA 288 0.5764 MPGSLNVTGLSGAALPPVRVSVRARAASLYEVLRIKQNASAVEIKSAYRNLAKAYHPDSAVRPSESDERDFIEIHEAYATLSDPSARSLYDLSFP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00227 95 Pfam DnaJ domain 29 91 IPR001623 -
Pste8g00227 95 SMART dnaj_3 27 86 IPR001623 -
Pste8g00227 95 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 19 93 - -
Pste8g00227 95 PRINTS DnaJ domain signature 48 63 IPR001623 -
Pste8g00227 95 PRINTS DnaJ domain signature 66 86 IPR001623 -
Pste8g00227 95 PRINTS DnaJ domain signature 30 48 IPR001623 -
Pste8g00227 95 PRINTS DnaJ domain signature 86 95 IPR001623 -
Pste8g00227 95 SUPERFAMILY Chaperone J-domain 25 92 IPR036869 -
Pste8g00227 95 CDD DnaJ 30 83 IPR001623 -
Pste8g00227 95 Gene3D DnaJ domain 20 94 IPR036869 -
Pste8g00227 95 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Pste8g00227 95 ProSiteProfiles dnaJ domain profile. 28 94 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00227 Pste-Chr8 1249718 1250005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00227 21 91 C2H2 Transcription Factor Family AT1G74250 40.000 3.83e-09 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00227 8 1249718 1250005 Pste8g00227 8 1249718 1250005 ECH