Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00223 TTTTTTTTTTTTTCATTTTTTATTTTCTTTATATTTATTATTTGTTCTTTATTTATACCCACAAAATTTATTGAAATTAAGCATCCATCAAAACCAACCAAAGCAAAACTAACATCACTGGCATAGAAATCAAGAATGGGGAAGAAGAAGAGAAGTAGGGTTTCCGAAGACGAGGAAATCGAATCTGACACAAACGCCTCCGATCAAAACCAAAACACCCTCTACCAGATTCTTGGTGTGGAGAGAACAGCATCTCAACAAGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAATCCTGATGATGAGGAAGCTAAAGCGAAGTTTCAGCAACTGCAAAACGTTATCTCAATTCTTGGGGATGAAGAAAAACGGGCTGTTTATGATCAGACTGGTTGTGTTGATGATGCTGAGCTTGCAGGAGATGTTGTTCAGAACCTTAGAGAATATTTCAGAGCAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACACTGAGAAAAATGATTTGATTGATCTGTACAAGAAGTACAAGGGTAATATGAACAGGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACACCGATTCAAGGATATTCTAGATGAGGTTATAGCTGCTGGAGAACTAAAGGAAACAAAAGTCTACAAGAAATGGGCAAAGAAATTATCAGAAACCAAGCCCCCAACTAGTCCCTTAAGAAGGCGAGCAAAATCATCAAATAAGCAACCAGAAACGGATCTGCATGCTATCATTTCACAACGTAGGTTTGAGAGGAAAGACAGATTTGATTCAATTATGGAGGGGGTCAAATGCAAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAGGAAGATGGAAAACAGAAGGTCCTCAAAAAGGTCAAAGAGAAAATAACCAGCTTATGTTTTTGTGTACAATTTGTTTGACTGTGAACGGTACTTCTGCTGTTTGCAGTGGGAATTCTTCTTTTCTGCTGAAGTACAAGAAGTTATCAGCATGTGCA 1065 0.3831 MGKKKRSRVSEDEEIESDTNASDQNQNTLYQILGVERTASQQEIKKAYYKLALRLHPDKNPDDEEAKAKFQQLQNVISILGDEEKRAVYDQTGCVDDAELAGDVVQNLREYFRAMYKKVTEADIEEFEANYRGSDTEKNDLIDLYKKYKGNMNRLFCSMLCSDPKLDSHRFKDILDEVIAAGELKETKVYKKWAKKLSETKPPTSPLRRRAKSSNKQPETDLHAIISQRRFERKDRFDSIMEGVKCKNPLKRNLKLHRGRWKTEGPQKGQRENNQLMFLCTICLTVNGTSAVCSGNSSFLLKYKKLSACA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00223 310 PRINTS DnaJ domain signature 48 63 IPR001623 -
Pste8g00223 310 PRINTS DnaJ domain signature 30 48 IPR001623 -
Pste8g00223 310 PRINTS DnaJ domain signature 65 85 IPR001623 -
Pste8g00223 310 PRINTS DnaJ domain signature 85 104 IPR001623 -
Pste8g00223 310 SMART dnaj_3 27 85 IPR001623 -
Pste8g00223 310 MobiDBLite consensus disorder prediction 1 26 - -
Pste8g00223 310 CDD DnaJ 28 82 IPR001623 -
Pste8g00223 310 MobiDBLite consensus disorder prediction 1 15 - -
Pste8g00223 310 ProSiteProfiles dnaJ domain profile. 28 93 IPR001623 -
Pste8g00223 310 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 16 248 IPR042977 -
Pste8g00223 310 Gene3D DnaJ domain 12 126 IPR036869 -
Pste8g00223 310 MobiDBLite consensus disorder prediction 199 220 - -
Pste8g00223 310 SUPERFAMILY Chaperone J-domain 27 99 IPR036869 -
Pste8g00223 310 Pfam DnaJ domain 29 90 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00223 Pste-Chr8 1230900 1233388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00223 30 90 C2H2 Transcription Factor Family AT1G74250 39.394 1.69e-08 53.9