Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00221 TGTTCCAACATATTCCTCATCAAAGAAAATAACATCCGACTAGATGAATTTGGTCTTGCAAAGCTTCTTAATACCGAAAACCTTACTTACATGGCAGTCGGATCTCTTAACTACATGTGTCCTGAGGCCTTTGCCAGTATGCCTTACGGTTATAAATCTGATATGTGGTCACTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACCGACATTTCCTGCTCCAATCTCCATTTCTCTGCTGGCAATTGTTTACTCTTCCACACTGAAACAACTTATCAAGACCATGCTGAGGAAAAACCCTGAACATAGACCAATGGTGAGTTCAACTGATATTTTTTTTTTTTGTGTAACTCATTTATGTGGAGCTGTTCATTCTTGTATTGTTCTTTATTGTTTGGCATCTGAATTATTAAGGCATCCTCATTTACAACCTTATGTTCTACACTGTCGTAATGCATCATCTATTTTTCTACCAGTACATCTTATAAATAGTAAAAGGAAAAAAAGGAAAAACAAATCTAGTGGTAGCACAAACTATTGGGATAAAGAGGCAAGATTGGCTGGATTAGTGAATTGTTTGGAGCGAATTTATCCTGTTGAGGCAAATGGAGAAGTACAAACACGGAATCAGCATAATGATGGAAAGCTAGCAGTTTCAACCAGCATGGAAGACAACCTTGAGACCAAAATGCTACACTGGAATTTTCTACTAGTGGCTCAAAAGATGGCTCTACAACATTTGAATCAACTGTTTGCAGTGTGCGTAAGGAAGGGGACTTCAAAAATAGAATTGCAAGGGACACATCTGACAATGAAATCACTTCAAAGATCATTTGCAATTGACATAAACAAAATGATTAAAAACATGGAAGATACTTTTTCCAATGAAGATTGCAATACAGATGAAGCTCTTAATGAAGGTGCTAAACCTGAGGACTCTAGTAAATCAATAATGTCGAGTGAAGATAGCAACAATTCTGTGCATGAAAAAGGAGATGAGCATTTGCATGAGTTAGATGTGATTGATTCAAGTGCACTGTCAACAAAAGTTGAAGATAATTTTTCCAATGAAGGTTTTGATCAAATACAAGTAAGGAGGGAAAATGCTAAACATGAGGAATCCAGAAAATCGATAGTGTCCATGATAAAAATGGGTCCATTGATGATATCACTTCAAAGATTTCGCTTGATTTCTTTGGATGAAGAGCAAGGATTTACAGCTGAACATTTTAAGAAGTCTGATGTGATTGAAAAAAATGCAGGGGCTACAAAAGTTGAATATAATTTATCTAACGAAGATTTTGATCAAACTGAAGCAGAGATGTTAAATGCCAAGCCTGAGGCCTCCATAAAACCAATAATGTCCGGTGAAAACAGTGACAATAATGATAAAGATGAGTCCATTAATGAGATTACTCATCAGATGTTGACAAACATGCAGCAGCTTCAGTATTTGTGTCTTTGTGATAGGTGTGGTGTTCATTATTTATACATTATTATTGGAGGCAGGAAATTAACATCCCATAAATTCTTCGCTGGTGAGCAGTGTATTTGGAACAAGGCAAAGAAGGACAAGACTGAGGCACCAACCAAGGAGCCAACAGCAGCAGCTGAGGCACCACTGCTAGGGGCAGGGGCCGGGGCAGCAACCTCTGTGGCAGCCAATGCTGCACTCATGGAGGCAGCAACAATGAGAACAGCACAGAGACCCGCTTGGTTTATGGTGAAAGAAGCTGTTTTATTGGAGCTTGCTTTTGTGTTTTGCTGCAGGTCTGAGGAAGCATGA 1788 0.3859 CSNIFLIKENNIRLDEFGLAKLLNTENLTYMAVGSLNYMCPEAFASMPYGYKSDMWSLGCCMFEIVAHQPTFPAPISISLLAIVYSSTLKQLIKTMLRKNPEHRPMVSSTDIFFFCVTHLCGAVHSCIVLYCLASELLRHPHLQPYVLHCRNASSIFLPVHLINSKRKKRKNKSSGSTNYWDKEARLAGLVNCLERIYPVEANGEVQTRNQHNDGKLAVSTSMEDNLETKMLHWNFLLVAQKMALQHLNQLFAVCVRKGTSKIELQGTHLTMKSLQRSFAIDINKMIKNMEDTFSNEDCNTDEALNEGAKPEDSSKSIMSSEDSNNSVHEKGDEHLHELDVIDSSALSTKVEDNFSNEGFDQIQVRRENAKHEESRKSIVSMIKMGPLMISLQRFRLISLDEEQGFTAEHFKKSDVIEKNAGATKVEYNLSNEDFDQTEAEMLNAKPEASIKPIMSGENSDNNDKDESINEITHQMLTNMQQLQYLCLCDRCGVHYLYIIIGGRKLTSHKFFAGEQCIWNKAKKDKTEAPTKEPTAAAEAPLLGAGAGAATSVAANAALMEAATMRTAQRPAWFMVKEAVLLELAFVFCCRSEEA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00221 595 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 341 - -
Pste8g00221 595 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00221 595 SMART serkin_6 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00221 595 MobiDBLite consensus disorder prediction 298 333 - -
Pste8g00221 595 SUPERFAMILY Protein kinase-like (PK-like) 2 121 IPR011009 -
Pste8g00221 595 Gene3D Transferase(Phosphotransferase) domain 1 1 185 - -
Pste8g00221 595 Pfam Protein kinase domain 2 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00221 Pste-Chr8 1221752 1227511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00221 3 105 MAP Kinase Kinase Kinase AT4G14780 27.350 1.16e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pste8g00221 Pkinase 9.3e-18 CL0016