Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00215 ATGGATATGGAAGCTGAGATGGAAATGCTGAGGCTCAAAGTGAAGCAAACTATGGATATGTACAGCTCAGCATGCAAAGATGCAATCTCAGCCCAAAACAAGGCTAAAGAGATTAACCAATGGAAGAAGGAACGTATGGCTGAGGAAGAAGCTAAGTTATCTAAAGAAGCAGCTCTTGCAATGGCAGAAAATGAGAAATTAAAAGCCAAAGCTACCGTGGAAGCAACTGATGAAGCAATTGAGATGGTTGAAAGGGAAACACAGAGAAAATTTGAAGCAGACATGAAGGCCAGGAGAGAGGCACAAGAAAAGGATAGGGCATTACCTCAGTTGCTTTGCAATGATACCAAATACAGAAGATACACTATACAGGATATTGAAGAGGCCACTGATGATTTCTCTCCATCAATGAGAGTAGGTGAAGGTGGGTATGGACCTGTGTTTAAAGGCATACTTGATCACACCGCGGTTGCAATCAAAATTTTAAACCCTGATGCTACCCATGGCAAGAGGCAGTTCCAACAAGAGTATGGATGCTTAGTATATGAGTACATGGAAAATGGCAGCTTAGAAGATAGACTATTGATGAAAAATGATAGTCCTCCCATTCCATGGTGGAAACGTTTTGAAATAGCTGCTGAGCTTGCAACTGCACTCCTTTTCCTTCACCAAAAAAAGCCAGACCCAGTTGTGCACAGGGACCTTAAACCAGCAAACATTCTCTTGGACAAGAATTTTGTGGGCAAAATAAGTGATGTTGGTCTTGCAAGACTAGTGCCAGCTTCTGTGGCTGATTCTGTCACACAATATCACATGACTGCAGCTGCTGGAACATTATGTTACATTGATCCTGAGTACCAACAAACAGGAAAGTTAACAACAAAATCAGACATATATTCCTTGGGGATAATGCTACTACAAATAGTCACAGCCAAGCCTGCAATGGGGCTTGCTCACCATGCAGAGAGGGCAATTAAGAAGGGAACATTTTCAGAAATGCTTGATCCTGCCATTACTGATTGGCCACTGGAAGAGGCTCTAGCATTTGCCAAACTTGCATTGAGTTGTGCAGAACTCAGCAAAAAGGATAGGCCTGATCTTGCATCAGTGGTTGTTCCAGAGCTTAACCGTTTAAGGGACTTTGGATTGGCATCACAGAACAATCAGAGCCTTAGCCACCCTCCCACGCCTCTGCAAAGTTCATGA 1206 0.4303 MDMEAEMEMLRLKVKQTMDMYSSACKDAISAQNKAKEINQWKKERMAEEEAKLSKEAALAMAENEKLKAKATVEATDEAIEMVERETQRKFEADMKARREAQEKDRALPQLLCNDTKYRRYTIQDIEEATDDFSPSMRVGEGGYGPVFKGILDHTAVAIKILNPDATHGKRQFQQEYGCLVYEYMENGSLEDRLLMKNDSPPIPWWKRFEIAAELATALLFLHQKKPDPVVHRDLKPANILLDKNFVGKISDVGLARLVPASVADSVTQYHMTAAAGTLCYIDPEYQQTGKLTTKSDIYSLGIMLLQIVTAKPAMGLAHHAERAIKKGTFSEMLDPAITDWPLEEALAFAKLALSCAELSKKDRPDLASVVVPELNRLRDFGLASQNNQSLSHPPTPLQSS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00215 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Pste8g00215 401 Gene3D Transferase(Phosphotransferase) domain 1 185 393 - -
Pste8g00215 401 PANTHER OS02G0152300 PROTEIN 3 388 - -
Pste8g00215 401 SMART serkin_6 133 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00215 401 Gene3D Phosphorylase Kinase; domain 1 102 184 - -
Pste8g00215 401 Coils Coil 31 79 - -
Pste8g00215 401 ProSiteProfiles Protein kinase domain profile. 133 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00215 401 SUPERFAMILY Protein kinase-like (PK-like) 114 371 IPR011009 -
Pste8g00215 401 Pfam Protein kinase domain 176 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00215 Pste-Chr8 1199161 1201399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00215 2 382 Receptor kinase-like Gene Family AT5G12000 65.261 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste8g00215 Pkinase 1.1e-27 CL0016