Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00204 GCTGTTTCTCTCTCACTAGAGTTGATAAAGATGAAGTTGGTAATGCTTGAGGAGGGTGTTGTGGCAATTGGCTTAGCTATTTATGATGAAAAATTTCCAAAAATGGAAAAAGGGATTTCAATGGAGGAGATATCCGTTGTGGTTGCAGTGCCATTTAGAGTAGGTAATTGTAATTCAGTCTGTGATAATCCAACCATAGTTCCCCACATGGATGTATCCAGATTTAAGCTGATGGCGGAATCAGGGTTGTTATCTAATTCTGTAAGTAAGGTTTTCACTGAGACAGTTGCAGGTCCTGATGGTGGAAATTTAGAGAATGAAGTTAGTATTGCTGAAGTCATACCACCAAAACAGGATAGAGAAGGAGAGAGTCCTTTGATGGATGTGATATCCCAAAATAGAAGCACTTTGGTTGCTGGTGACGAAGTGTTAACCACAGAAATTGAGGAGGATTTGTTGTCATTGGAAGGTGATCAGTTTGTTGATAGCTCATGTTCGCTTTCAGCAGTCAGTGAGAACAGCAGTGTGTGTGGAGCGGAATCCTTCTGTTTTGATGCTGCTTCGGATGTTGGGACGCCGTGTTCCGCGGATGCAGAGAAGAGCATCTGTGCTGTCAATATTGTTGCTGAGACTGTTGACTTGGGGGAGTCAAATGTTGACACAGATGTTATGACTGAACCTCTTTCTGTGGAAATGAACCTTGAAGAAGAGACTGGAGTTGGATCTGTCCCAAAGTCTTCTGCAGTTGTTCTTCATCACTTACCTCATGAAAAGGGGGTGAGTGGAACAACTGGTCGAAGTGTTTTTGAATTGGACTATAACCCACTTTATGGATTCATATCTCTGTGTGGAAGAAGACCTGAGATGGAAGATGCAGTTGCTACTGTACCTCGATTTTTGAAAATTCCTATTCAAATGCTAATTGGTGATCGAGTACTTGATGGATTAAACAAGTGTTTTAGTCAGCAGATGACCCATTTCTTTGGAGTTTATGATGGCCATGGTGGCTCTCAGGTTGCAAAGTATTGTCGTGATCGTATCCATATGGCCTTGGCTGAGGAAGTAGAATTTTTCAAGGAAGGTCTAATCACTGGAAGTATGAAAGATGGATGTCAAGATCAGTGGAAAAAAACTTTCACCAATTGTTTCTTAAAGGTCGATGCTGAAGTTGGAGGAAAAGTTAATAATGAACCTGTTGCACCCGAAACTGTTGGCTCCACTGCCGTTGTTGCTGTTATTTGTTCATCTCATATCATAGTTTCAAATTGTGGTGATTCACGAGCGGTTCTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGATCATAAACCTAACCGACATGATGAATATGCAAGAATTGAGGTGGCTGGAGGAAAGGTGATTCAATGGAATGGCCATCGTGTATTTGGTGTTCTGGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTACATTTATTCCGCGTACAAAAGACGACGATTGTCTCATTCTGGCGAGTGATGGTCTGTGGGACGTTATGACAAACGAGGAGGTGTGTGACCTTGCTCGACGACGAATACTTCTGTGGTACAAGAAAAATGGCATGGAACAACCCTCACCAGAAAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCTGCAGAATTCCTATCAAACCGGGCCCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTTGATTTGAAACCCCAAAGAAAATATAAGAGCAACCTGTGTGTTCATAAAGAAGCAGTAGCTAATTGGCAAGAGTGGCTTTCAAGGTGTGATCCACTGTCACAGGTTTTACTGTTGCCTGATTCCTCCTCTCAATTATGCAGCAAAATGGAGCTTGGTCCTGAAATTTGTGTCGGTGGTGGATTCATATCAATGGCCATGATCCTAGTCCACTGGTTACATTACACTCTAGCAATGATGGTGGGGGACAAGGACAAACAAGGGACTATGAATTATGGTGTACCTGTTCATAATGTTGTGATGATGTTCCAC 2046 0.4247 AVSLSLELIKMKLVMLEEGVVAIGLAIYDEKFPKMEKGISMEEISVVVAVPFRVGNCNSVCDNPTIVPHMDVSRFKLMAESGLLSNSVSKVFTETVAGPDGGNLENEVSIAEVIPPKQDREGESPLMDVISQNRSTLVAGDEVLTTEIEEDLLSLEGDQFVDSSCSLSAVSENSSVCGAESFCFDAASDVGTPCSADAEKSICAVNIVAETVDLGESNVDTDVMTEPLSVEMNLEEETGVGSVPKSSAVVLHHLPHEKGVSGTTGRSVFELDYNPLYGFISLCGRRPEMEDAVATVPRFLKIPIQMLIGDRVLDGLNKCFSQQMTHFFGVYDGHGGSQVAKYCRDRIHMALAEEVEFFKEGLITGSMKDGCQDQWKKTFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAVICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRHDEYARIEVAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFIPRTKDDDCLILASDGLWDVMTNEEVCDLARRRILLWYKKNGMEQPSPERGEGIDPAAQAAAEFLSNRALQKGSKDNITVIVVDLKPQRKYKSNLCVHKEAVANWQEWLSRCDPLSQVLLLPDSSSQLCSKMELGPEICVGGGFISMAMILVHWLHYTLAMMVGDKDKQGTMNYGVPVHNVVMMFH 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00204 682 ProSiteProfiles PPM-type phosphatase domain profile. 276 581 IPR001932 -
Pste8g00204 682 PANTHER PROTEIN PHOSPHATASE 232 581 IPR015655 GO:0004722|GO:0006470
Pste8g00204 682 ProSitePatterns PPM-type phosphatase domain signature. 327 335 IPR000222 GO:0043169
Pste8g00204 682 Gene3D - 263 591 IPR036457 -
Pste8g00204 682 SUPERFAMILY PP2C-like 268 583 IPR036457 -
Pste8g00204 682 SMART PP2C_4 266 579 IPR001932 -
Pste8g00204 682 CDD PP2Cc 277 581 IPR001932 -
Pste8g00204 682 Pfam Protein phosphatase 2C 312 574 IPR001932 -
Pste8g00204 682 FunFam Protein phosphatase 2C 16 264 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00204 Pste-Chr8 1150989 1155858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00204 41 590 PP2C-type Phosphatase Gene Family AT1G17550 46.643 1.38e-157 462