Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00197 ATGTTAGGGGCCTCATGCATTATCGTACTTCTTCTTCTTATTCTCACCTCCTTTCTCTCGTCAATCAACTGTCTGTCTTTTAACATAACAAAGTTCGACGACCCGACAACCTCATCGGACATATCCTACGAGGGCGACGGAAGGGCCACCAATGGCTCCGTCGACCTTAACAAGGTCAGTTACCTCTTCCGTGTCGGAAGAGCCATCTACGCCAAACCCCTCCGCCTGTGGGACCCATCATCCTCCAACCTCGTCACCGACTTCGCCACGCGCTTCGCCTTCACCATCGAGAGAGTGAACCTAACCGACACCTCCTACGGCGACGGCTTCGCCTTCTACATCGCCCCTTTGGGCTACCGGATTCCGCCCAACTCCGGCGGCGGCACCTTCGGCCTTTTCAACGCCACCACCAACAGCAACCTCCCGGAAAATCACGTCCTCGCCGTGGAATTCGACACCTTTGTCGGCTCCACGGACCCTCCAATGCGACACGTTGGCATAGACGACAACTCTTTAACCTCCGCTGCATTTGCCAACTTCGACATCGACAACAACCTCGGAAGAATGTGTCACGCGCTTATCACTTACACTTCCTCAACTCAAACACTCTTTGTTTCATGGTCCTTCAAAGGAAAAGCACCCACAAACACAAACAACAACAACAACACCATATCTTATCAGATTGACCTCAAGAAGATTCTCCCCGAATGGGTCAACATTGGTTTCTCTGCTTCAACGGGGCTTTCCACAGAGAAAAACACCATTTTTTCATGGGAGTTCAGTTCAACTCTGAGCTCAAACGGTTTTGGTAACGCACCAGCCAAAGGGGCAAACTCACATACCCTTGTTCTTATTGTTGCTGTTGTTTGTCCATTGTTTTTGCTCTTTGTCGCTGCCACTTTTGCTGTTATGTTGCTAAGGAAAAAGAGAAGAAGGGATGATTGTATGTTGTATGAAGTTGGCGATGAAGAACTGGGTCCCGCATCGGTTAAATTTGATTTGGACAAAGCAACGATTCCGAGGAGATTCGAGTACAAAGAACTCGTGGACGCTACTAATGGTTTTTGTGATGATAGAAAGCTTGGACAAGGAGCTTCAGGGCAAGTCTACAAAGGAGTTTTGAGCTACCTTGGAAGAGTTGTTGCTGTGAAGAGAATCTCCGCAGAGTTTGAAAACTCGGAGAGAGTTTTCACCAACGAGGTCAGAATCATAAGCCGTTTGATCCACAAAAACTTGGTACAATTCATAGGGTGGTGCCACGAAGAAAACGAGCTTCTTTTAGTTTTCGAGTACATGCCAAATGGGAGTCTCGATAGTCACTTGTTTGGGAACAAGAGGATATTGGAATGGAACATAAGGTACAAGGTTGCTTTAGGAGTTGCAAACGCGCTTCGGTATCTTCATGAAGATGCAGAGCAGTGTGTTCTGCATAGAGATATAAAATCAGCGAATGTGTTGTTGGACACAGAGTTTAACACCAAGGTGGGGGATTTCGGCATGGCAAAGTTGGTGGATCCGAGGTTGAGAACACAACAAACAGGAGTGGTTGGAACGTACGGTTACTTAGCACCTGAATATGTTACTGGAGGAAGAGCTAGCAGAGAGTCTGATATGTACAGTTTTGGGGTTGTGGCTTTGGAGATTGCAAGTGGGAGAAGGACTTATCAAGATGGTGAGTTTCACGTTTCTTTGATGAATTGGGTGTGGCAACTTTATGTGGAAGATGAGATTCTGAGGGCTGCGGATGAGAAATTGGGGAATGAGTTTGATGTGAATGAGATGAAGAGTTTGCTTGTGGTGGGGTTATGGTGTACCAATCCTAATGATAAAGAGAGGCCAAAAGCTGGGGAAGTGATAAAGGTCTTGAACCTTGAGGCACCTTTGCCTATGCTTCCTCTTGACATGTATGAACGTGCTCCTCCTGTTCAACTCATTAGGATGCCACATCATCACAATAACAATAACAATCACTCTCTGCAGTCTCCACCTATTACTAATAGTCTTATGAGTGTTGGAAGATGA 2022 0.4664 MLGASCIIVLLLLILTSFLSSINCLSFNITKFDDPTTSSDISYEGDGRATNGSVDLNKVSYLFRVGRAIYAKPLRLWDPSSSNLVTDFATRFAFTIERVNLTDTSYGDGFAFYIAPLGYRIPPNSGGGTFGLFNATTNSNLPENHVLAVEFDTFVGSTDPPMRHVGIDDNSLTSAAFANFDIDNNLGRMCHALITYTSSTQTLFVSWSFKGKAPTNTNNNNNTISYQIDLKKILPEWVNIGFSASTGLSTEKNTIFSWEFSSTLSSNGFGNAPAKGANSHTLVLIVAVVCPLFLLFVAATFAVMLLRKKRRRDDCMLYEVGDEELGPASVKFDLDKATIPRRFEYKELVDATNGFCDDRKLGQGASGQVYKGVLSYLGRVVAVKRISAEFENSERVFTNEVRIISRLIHKNLVQFIGWCHEENELLLVFEYMPNGSLDSHLFGNKRILEWNIRYKVALGVANALRYLHEDAEQCVLHRDIKSANVLLDTEFNTKVGDFGMAKLVDPRLRTQQTGVVGTYGYLAPEYVTGGRASRESDMYSFGVVALEIASGRRTYQDGEFHVSLMNWVWQLYVEDEILRAADEKLGNEFDVNEMKSLLVVGLWCTNPNDKERPKAGEVIKVLNLEAPLPMLPLDMYERAPPVQLIRMPHHHNNNNNHSLQSPPITNSLMSVGR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00197 673 SMART serkin_6 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00197 673 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Pste8g00197 673 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Pste8g00197 673 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Pste8g00197 673 Pfam Legume lectin domain 25 263 IPR001220 GO:0030246
Pste8g00197 673 Gene3D Transferase(Phosphotransferase) domain 1 432 626 - -
Pste8g00197 673 SUPERFAMILY Protein kinase-like (PK-like) 339 636 IPR011009 -
Pste8g00197 673 Pfam Protein kinase domain 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00197 673 PANTHER - 49 626 - -
Pste8g00197 673 FunFam L-type lectin-domain containing receptor kinase IX.1 432 632 - -
Pste8g00197 673 FunFam L-type lectin-domain containing receptor kinase IX.1 340 431 - -
Pste8g00197 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Pste8g00197 673 Gene3D - 23 271 - -
Pste8g00197 673 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00197 673 MobiDBLite consensus disorder prediction 648 673 - -
Pste8g00197 673 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Pste8g00197 673 CDD lectin_legume_LecRK_Arcelin_ConA 25 264 IPR001220 GO:0030246
Pste8g00197 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 264 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00197 Pste-Chr8 1091920 1093941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00197 4 635 Receptor kinase-like Gene Family AT5G10530 43.458 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g00197 Pkinase 5.4e-51 CL0016