Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00175 AGCGTATATAGCAAAGTGAGTAGGCGGAGGAGATTTGATTTGTGTGGCTTATATTGCATTGCGGGTGAGGAAGGTGTCCAGATGGCATAAGGAGAGAAGATGTAATAGCAGCATCCAATGAGGTTTGCATATCCTAATCCACTGTAATAGTATAAAGAAAGCTTCCTTCCTTGGCACTCTGTCCATTAAGAAGGAATTGCCATGGCTACCTCCGGCATCCAGCAATCGGCATTCGGCGGTCAAAGTGGTCTGAAGCAGGTCAATGAGTTTGTCCGCAAGAGCGGTGGGTCCGGCACAGGTCGCACGAACATGCGCCGTACCGTCAAGAGTGCTCCTCAGAGCATCTGGTATGGGCCGGATCGCCCGAAGTACCTGGGGCCGTTCTCGGAGCAGATACCGTCGTACCTGACAGGAGAATTCCCGGGAGACTACGGATGGGACACGGCGGGATTGTCGGCGGACCCAGAAACGTTCGCAAGGAACCGTGAGCTGGAGGTGATTCACAGCAGATGGGCGATGCTTGGGGCGTTGGGATGCACATTTCCAGAGATCCTTGAGAAGAACGGTGTGAAGTTCGGTGAGGCTGTTTGGTTCAAGGCTGGTGGGCAGATCTTCTCTGAGGGTGGGCTCGACTATTTGGGCAACCCAAACCTTATCCACGCTCAGAGCATCCTGGCCATCTGGGCCTCCCAGGTTGTCCTTATGGGCTTTGTTGAGGGCTACAGAGTTGGTGGCGGCCCTCTTGGTCAAGGACTCGACCCCATCTATCCCGGTGGTGCCTTCGACCCTCTTGGCCTCGCTGACGACCCTGATTCCTTCGCTGAGTTGAAGGTCAAGGAACTCAAGAATGGTCGCTTGGCTATGTTCTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACCGGCAAGGGTCCCATCCAGAACCTCTTCGACCATCTTGCCGATCCTGTCTCCAACAATGCTTGGGCTTATGCCACCAACTTTGTCCCTGGACAATGATCCTTTCCTCTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTTCTGTTACCCTCACACTTTTCCATATTTCATTTTCCATTTTCCATTTTCCATTTCATCCCCAACAACCTGCCTCTTCGCATTACAGCTTTCTTTCCCAATCACCCCACATATCTTCTTCCGTTGC 1172 0.5222 MATSGIQQSAFGGQSGLKQVNEFVRKSGGSGTGRTNMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGGQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGQGLDPIYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLFDHLADPVSNNAWAYATNFVPGQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00175 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Pste8g00175 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Pste8g00175 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Pste8g00175 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 18 264 IPR001344 GO:0009765|GO:0016020
Pste8g00175 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00175 Pste-Chr8 994437 995666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00175 1 265 Chloroplast and Mitochondria Gene Families AT2G05070 85.283 3.71e-174 479