Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00174 GTCCAACACTTCCGTGATTTTCATAAATTCCAACGACGGTTGCGCGCCCTCACAGTTACTAATCTCACACTCTCTCTCTCTCTCTGTCATCATTCTCAATCTCTCTCTCTCTCTCTCTCAATTCTTCACCACAATCTCCAACCCTTTTGCTATGAATCTTGGAACCACTTGTAATACCTGCAGACACAACATGTGAAGTGAAACGCCACCACTTGTTTCACCAGATCCTTTGGTGTTTGATGGGGAAAAAAGGAGGCAGCTGGTTCTCCTCGGTGAAGAAAGTTTTCAAGTCATCTTCTAAAGACTCGCCTCAACCTGAGAAGAAGAAGGAAAACATACAGAAATTACAGCATGAAGTGGCAGAGGTGGTGTCATGTGAGCATTTTCCAGTAGAGAGTTCTCTAGATAATGTGACAAATGAAGAGAGTACCACATCAACGCCAGTGAGTAAAGAAAGAAGTCATGCCATTGCTGTTGCAGCAGCAACAGCCGCCGCTGCAGAGGCTGCTGTGACCGCCGCTCAAGCTGCTGCAAAAGTTGTGAAATTGGCAGGCTATGGACGCCACTCCAAGGAAGAAAAAGCTGCAACACTCATTCAATCATACTATAGAGGCTATCTGGCGAGACGTGCACTGAGGGCGCTGAAGGGATTAGTTAGGCTGCAAGCACTGGTGAGGGGACACAACGTGAGGAAGCAAGCGCAGATGACGATGCGGTGCATGCAAGCGCTGGTGAGGGTGCAGGCCCGAGTCAGGGCTCGCCGAGTTCAACTCAGTGATAACGGTGATGATCACGTCCAAGAATATGATCATAAGCCCCTCACCATGGCCAGCCCTATGAGAAGAGTAGACAATAATGGTTGGGACAATAGGCGTCAAAGTACCCACAAAATTAAAGAAAACGATCTCAGAAAACATGAAGCTCTCATCAAGAGAGAGAGAGCTCTTGCATATGCTTTCCACTATCAACAGCAACAGCAGAAGCAATTTTTGCAGCCAGACCCGAATGGTAACGATGATGTATACGAGCGTGAAAAGGGTCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCCCAACCAAACAATGCCAAGAACATGGGACCACATGAGACTCATGCTTCAACAACATCAACCACCACAGATAACATGTCTGAGAAAACCGTAGAAATGGACATGCTTGCAACTCCAGGCCCAACCAACTTCAAAAGCATAAGCCCCATGGCCCAAGGCTTTGTTGATTCCAGTCCAGTCTCCAATAGGTACCATCACATTCCTCCAAGCCCAAACAGGCCCAGCTATATGGCTCCAACTCAGTCTGCCAAGGCCAAGGCCCGGGCCCAAGGCCCATCCAAGCCTCGGGTTTCTGCTGGGCCTCAGTGGAACTTCTCAACCAAGGGAGGCTCCACCTGTGACTCCTCTAGCTCAGGTGGAGGGATTGCTGCTTACCAAATTCCAAGAAGCCCAGGCCCAAAAGTTAATGGCATTCGTTCCCAGTCTAGAAGGATTATGGGTAGCAGTCCAGATTACATTGAGGATTGGGCCCTTCCTCTTGGAGCCCATGGTTGGGCTTAATTTGCTTTGGTTTTTGGTTCCTATACCCAACTTTTAATTGTTGCATCCATCTTTTTATATTTTGGAAAACCTATTTCAAAATGTGTAAACTCAAAAAGGAGTGTTAAGAAACTCTATCAGAAATTTTCTTTCTGAAATTTTTTTTACAATTTGTTAAAATTTATTGAAAATCACAGTTTGTGATTTCCAATCAATTCTAACAAATTATAAGAAAAAATCAAGCTATAGATTTTAAGAGAGTTTATAAGAGATTTTCTGTACCTCACATAAAAAATTATGGATGCATGAACTAAATCCCATTTGAATTTTTAGCATAAAGAATTAAAATCCAGTAATAATTATATAATGGAGTCTATGGTATGATCTGTGATTGATATGATATTTATGTACATTTTAATAATGTAGTTGGTCGTGTCAAGAACTGCAATTTTGAGATTGTGATATTGTAAGGACAATATATTATGTTTTACAAGTAAGATAAGAAGTTTGAGTTGAATTCTTTTT 2081 0.432 MGKKGGSWFSSVKKVFKSSSKDSPQPEKKKENIQKLQHEVAEVVSCEHFPVESSLDNVTNEESTTSTPVSKERSHAIAVAAATAAAAEAAVTAAQAAAKVVKLAGYGRHSKEEKAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRVQLSDNGDDHVQEYDHKPLTMASPMRRVDNNGWDNRRQSTHKIKENDLRKHEALIKRERALAYAFHYQQQQQKQFLQPDPNGNDDVYEREKGQWGWNWLERWMSSQPNNAKNMGPHETHASTTSTTTDNMSEKTVEMDMLATPGPTNFKSISPMAQGFVDSSPVSNRYHHIPPSPNRPSYMAPTQSAKAKARAQGPSKPRVSAGPQWNFSTKGGSTCDSSSSGGGIAAYQIPRSPGPKVNGIRSQSRRIMGSSPDYIEDWALPLGAHGWA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00174 445 MobiDBLite consensus disorder prediction 15 35 - -
Pste8g00174 445 Gene3D - 109 163 - -
Pste8g00174 445 MobiDBLite consensus disorder prediction 280 305 - -
Pste8g00174 445 MobiDBLite consensus disorder prediction 346 418 - -
Pste8g00174 445 SMART iq_5 111 133 IPR000048 GO:0005515
Pste8g00174 445 SMART iq_5 134 155 IPR000048 GO:0005515
Pste8g00174 445 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Pste8g00174 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 157 IPR027417 -
Pste8g00174 445 MobiDBLite consensus disorder prediction 376 402 - -
Pste8g00174 445 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Pste8g00174 445 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Pste8g00174 445 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Pste8g00174 445 PANTHER IQ-DOMAIN 5-RELATED 1 394 - -
Pste8g00174 445 MobiDBLite consensus disorder prediction 20 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00174 Pste-Chr8 988855 999118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00174 1 413 IQD Protein Family AT3G49260 47.277 3.94e-93 287