Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00163 CTTTTATACATACTCTTTCACAGTTTCACACTCTCTCTTTTGGTCGTACCTATAAATACCGAAAAATAAGGCAAAGACGTGGACTCAACGGTCCCTTCTCTCTCTCTTTCGCAGTTCCCACTTTCGAACAAAAACAAAAAAAAGAAAATCAGTCTCTTCAGTGTTGAGTTTTGAGTTGAGTTTCTTCTCTCTCTAGATTTTCTGTTTTGTTTTCTCTCTCTCTGCAATGTAGGTCGCCGGAGATGGCAAACTACCACCGCAACAACGTCGAAAACGTGGTCCTCGGCCACCACAACCGTTCGAAGTTTTCCTCCACACTCGCCGGCCACTTCCGTCTCTGGAACGCCGCCTCGTTCCGCCGCGTCATCTTCGACGCCGTCAGCTGCGGCGCCAGCTCCCGCTACGCGGATAGATCCGACACATCCTCCGAGAAGCCGCAGCACCAGCAGAGGACGACGAAGCCGAATAACAATGCGAAGTCGGAGAAGCTCTCGGATCTGCTGAGCATTGCGGAGGCCGAAGCCGACGTGGAAACGAAGAAGAAAGAGGAGAAGCTCGAGGAGCTGAAGCGCCTCGTGAAGGAGCTTCAGCACGAAGAGGATTCGGCGAAGAGAACCGAAGCTGCGGCCACGGTGAGGTTGCTGGCGAAGGAGGATTTGGAAGTTAGAGGAACGCTCGCGATGCTCGGAGCCATTCCTCCTCTCGTCGCAATGCTCGACGAAGCACAAAACGAAGTCGATTCGCTCGTCGCGTCGCTCTACGCGCTGCTCAACCTCGGAATCGGAAACGACGCGAATAAAGCAGCTATTGTGAAAGTTGGGTCTGTTGAGAAAATGCTGAAGCTGATTGAGTCTCCAGATGGTCTTGATTCTTCGGTTTCTGAAGCAATTGTTGCTAATTTCCTTGGATTGAGTGCTTTGGATTCGAATAAGCTCATAATTGGGTCTTCGGCCTCAATTTCTTTCTTAGTTAGAACCATTCAGAGTAAAGATAACAAGAGTAGTCCCCAAGCCAAGCAAGATGCTTTCCGAGCACTGTACAATCTTTCTATATTCCCAGCCAATGTTGCATTCATTTTGGAGACCGATTTGGTTGTGTTTTTGGTGGACTCAATAGGGGACATGGAAGTAACGGAAAGAACTCTTGCAATTCTGAGCAATTTGGTGTCAACCAGAGAGGGTAGAAAAGCTATTAGCGCTGTGCCGGACGCGATTCCAATCTTGGTGGATGTGTTGAATTGGACGGATTCGCCAGAATGCCAGGAAAAGGCATCGTACATTTTGATGGTTATGGCACACAAGTCCTATGGTGACAAGCAGGCCATGATTGAGGCAGGGATTGCAACATCACTGCTTGAGTTGTCCCTTTTGGGTACCACATTGGCTCAGAAAAGGGCCTCAAGGATATTGGAGATTTTGAGAGTGGACAAAGGGAAGCAGGTTTCTGCGAGCTATGGCATGGGTGCAGCTGTCTCTGCTCCTATTTGTGGATCTTCGTCGGGGAAGGCGGATGGAGGAGGAAGGGAATGTTTTGAGGAAGATGAAGAAATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGCAAAACATGAGGAAAATTGTAAAGAGGGCCAATTTGCCTCAAGATATTGTGCCATCAGATCATTTTAAGTCACTCACTTCAAGTTCGACTTCAAAGAGCCTGCCATTTTGATGCTAGGAAGAGAATCAAGGTTGAATAGAATAAACCGTGAAGTTAGTGTTCAAATCTTAGTTTTGTTGAATATTTAGGCTTAGTGTTATTTGCTAGAACCACCAAAGTAGCCGTTGCTTGTCAAAATCTTGATAGATAATTATAAAGTTATTTATAGTTTAAATCTCTTATAAGGTTGCATCCTTTTTGGTTTATTTGGTGTTTGAGTACCTTCTGTAGGACAGATTTTGCTTCATTGTGCCATGGTAAGTCCATTGTTTCTAAACTGAAAATGAGACCTTCTAAACTGTAGAAATGGACAATAGTAACGATGCTGTATAAGCTGGGGTACTTCCCAGTCAGGGGTATGACATGCAAAATTGGCTAAACTAAGGGTTGCTTCAGTCTTGCCATCGTTACAAGCGTCCCTACCTTCAAGGAGTCACTTTCAATCCATAGTACACTTTTGTCTCCCTATTGGCCCTACTACGTGTTTTTATATAAATTAATCTAATTGGATAAGTGGAAAACAGTGCAGATCATTTTCATATTTTATATAAACAATAGTGACTATTCACTACAGTTCTCTATTTGGGAATCTTTATCCTGTTGGTTTGTCAATTCCATGTGTTTGGTTATTTC 2333 0.4492 MANYHRNNVENVVLGHHNRSKFSSTLAGHFRLWNAASFRRVIFDAVSCGASSRYADRSDTSSEKPQHQQRTTKPNNNAKSEKLSDLLSIAEAEADVETKKKEEKLEELKRLVKELQHEEDSAKRTEAAATVRLLAKEDLEVRGTLAMLGAIPPLVAMLDEAQNEVDSLVASLYALLNLGIGNDANKAAIVKVGSVEKMLKLIESPDGLDSSVSEAIVANFLGLSALDSNKLIIGSSASISFLVRTIQSKDNKSSPQAKQDAFRALYNLSIFPANVAFILETDLVVFLVDSIGDMEVTERTLAILSNLVSTREGRKAISAVPDAIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGIATSLLELSLLGTTLAQKRASRILEILRVDKGKQVSASYGMGAAVSAPICGSSSGKADGGGRECFEEDEEMMSEEKKAVKQLVQQSLQQNMRKIVKRANLPQDIVPSDHFKSLTSSSTSKSLPF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00163 489 MobiDBLite consensus disorder prediction 67 83 - -
Pste8g00163 489 MobiDBLite consensus disorder prediction 53 83 - -
Pste8g00163 489 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 149 193 IPR000225 GO:0005515
Pste8g00163 489 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 25 489 - -
Pste8g00163 489 Coils Coil 87 128 - -
Pste8g00163 489 Gene3D - 100 252 IPR011989 -
Pste8g00163 489 Gene3D - 253 411 IPR011989 -
Pste8g00163 489 SUPERFAMILY ARM repeat 107 392 IPR016024 -
Pste8g00163 489 Coils Coil 430 450 - -
Pste8g00163 489 SMART arm_5 271 309 IPR000225 GO:0005515
Pste8g00163 489 SMART arm_5 313 352 IPR000225 GO:0005515
Pste8g00163 489 SMART arm_5 182 225 IPR000225 GO:0005515
Pste8g00163 489 SMART arm_5 226 270 IPR000225 GO:0005515
Pste8g00163 489 SMART arm_5 138 180 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00163 Pste-Chr8 923223 926429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00163 50 393 U-box Gene Family AT2G23140 31.714 7.52e-30 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00163 8 923223 926429 Pste2g01581 2 16755733 16757636 PCT