Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00162 GTACGCCAACAAATTATGGACAGTGAGCAGAGCATGCCGGCTCCATCTCATGTGCAAGTTGATGGTGCTCAGAAAGTTAGAGCATTACATGGGAGGACTACTGGCCCTACAAGGCGTTCTACAAAAGGGCAATGGACAGCAGAGGAGGATGATATCTTACGGGATGCTGTTGAGAGATTTAAAGGAAAAAATTGGAAAAAAATTGCGGAGTGTTTCAAGGATAGAACTGATGTGCAATGCCTACATAGGTGGCAGAAAGTTTTAAATCCAGATCTTGTTAAAGGTCCATGGTCCAAAGAGTGGTCATCTATTGCACAATATTTACCTGGACGTATTGGTAAGCAATGCCGAGAAAGGTGGGTTAACCATCTTGATCCTACTATAAAAAAGGAAGCATGGACTCAGGAAGAGGAGCTGGCTCTAATACACTATCATCAGATTTTTGGGAACAAATGGGCCGAAATATCAAAGCACATGCATGGAAGGACTGACAATGCTATTAAAAATCACTGGAATAGTTCTGTCAAAAAGAAATTGGATTCTTATTTGGCATCTGGCTTGCTTACTCAGTTTGAATCTGTTCCTCATGTTGGAAATCCAAATCAACCAACAAGGTTGCAATGTAGTGGAGATGATAAATGTCCCAAGGGGACTGAAGGAGAGGAGGTTTCAGAGTGCAGCCAAGGTTCAGCTAAGGCTGTTTGCTTTCCATCTGGTAGCTTACAAACTGGAGAGGCATATAGGTCAAATGAAGAATCTAGTCTTGGAAGGGATCATAGTCCAAGTCGAGCATCTTGTTCTGAGTCATATTATGTATCAATTGATGATGTTACTATATGCATCCCAGATATTTCTCAGCAAGAGGCTTGCACTTCTTCTCAATTCATTGAGCTTGAGCAACAGTCACAAGAACCTGGAAATTCCATTAGTGGGGATTGCCATTTCAATTTACATTCCTTACCCAACATTTCATCAATGGTCTTGGGGCAGGAATCCTTGCAGTTGCAAAGAGATTGTATACCTCCTAGTGAAATCTGTGACATAGTGAATATTCCTTTTCAGACTTCAGAGGAGTTGGGTGTTTCAACCTCCATGGGACCTGCATCTATGGATTCTATTAAACAAGAGCACATGTTGATTTCTGATGATGAATGTTGCAGAGTCCTGTTTTTGAATGCTATGAATAATGGGAGTTTTTCTCCTGTAGACTTTAATAAAGGAGAAGATGTAGTTGAATTTTCTGGATGCTCTTCGTTTCTTTGTCAATCTTGTAATAACCAAATATCTGAAACTGGGGGATCCTCAACTCGACAGCTAACTTGTCCTCAGTGTTATAATACGTATAAAGGAACTTCATCCTCCCAATCTGTCCATCCGGTAATTTCTGTTAGTTATGATAGGCTGGGGCCTACTGACAACAGCAATCAATTATTTGGGACAGAGGAACACAACTTTGTCTCCAGAGCTCCAGATAACTTCTCTTATGTCAACTGCATATCCTGTTCTTGTGTTGATGGTATAGGTAGTGAAGCAATGGAAGAGCCACATGATATTCTGAAGGGTACTTCAAAATTGGTTCCTGTCAATCGTTTTGGCTGTGGATCAGATGCCAAACAAACTTGTAATCCAACAGAGGAAAAACCAAATGAGTGTACTGAAAATGAGAACTTGGGGTCTCTATGTTATGAACCTCCCCGTTTTCCATGCTTGGATATGCCTTTTCTCAGCTGTGATCTTGTACAATCTGGGAGTGATACGCAGCAAGAGTTTAGTCCCTTGGGTATTCGCCATTTTATGATGTCTTCTATGAACTGTCTTACTCCTTTCAGGTTGTGGGACTCGCCATCTCGTGATGATAGTCCAGATGCATTGTTAAAAAGTGCAGCCAAAACTTTTACAGGTACACCATCCATATTAAAGAAACGTCACCGAGATTTGTTGTCACCACTCTCAGATAAAAGAATTGATAAGAGACTTGAGATTGACATGACATCTACCTTTGGTGACAATGAGACTCGAAAAGCAGATATGCCTTCATCTTCATTTCAAAAACAGAAAACCAGTGCATCTGTTGATGACAATAAAGAAAATTGTGGACAAGCTTATAAGGGTAAACAAGTATTGGAGCCAATTAAATCCGCAACTTTGGAAGAAAAGAACACTCAAAAAGATAGTGTTGACATTAATTCTCAGCATAATGTTAAGCAAGAACTTCTTGATTCTAAGATGAAGATTAATGCCTCGGTAGCTGCTGAGATTGAGAAGCAGGCTTCTGGAGTTTTGGTTGAACATGATGTGAATGACCTGTCACTGTCTTCTCCTGATCAAGTTGGTATAAAATCAGATAGAGGTCTGTGTTCAAAAGCTAAAACTCCCAAAAGCATGAAGAGGTCCTTGGAAGAAGCTCCAAATCAGAGTGGCAATTTGAAATTATCTTCTGAGAATCAATGCTCAAAAGTTAATACTAATTCTCCGTGTATTCGTGCAAAGCAGCATGAAAAACTTTCAGTTGCTGTTACTCGTGTGCAAGCTCCAGGGGAGAATTCAGCGGAACAAATCAGAAAGGATGGTGGTTTTGAAACATCTAGCATCTTTGGTGGAACACCTTTTGGGAAAAGCCTTGAATCACCTTCTGCATGGAAATCTCCGTGGTTCTTCAACACCGGCATTACAATTGAGGATTTTGGGTATTTAATGAGCCCAGGTGATAGAAGTTATGATGCAATCGGGTTGTTGAGAGAGATCAGTGAACAAACTGCTGCCACCTATGCTAATGCTCAGGAGATTTTGGGAGATGAAAGTCCTAAGGGATTACTGAAAGATGCATCGGAAAACAAGGACAGGGACCATGAAAATAATGATCCTCCCAATCAGCCTGAGAACCATTCTAAGTTGGCTTCAAATGCTTTGGTAAATATGATTCATTGA 2928 0.4057 VRQQIMDSEQSMPAPSHVQVDGAQKVRALHGRTTGPTRRSTKGQWTAEEDDILRDAVERFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPDLVKGPWSKEWSSIAQYLPGRIGKQCRERWVNHLDPTIKKEAWTQEEELALIHYHQIFGNKWAEISKHMHGRTDNAIKNHWNSSVKKKLDSYLASGLLTQFESVPHVGNPNQPTRLQCSGDDKCPKGTEGEEVSECSQGSAKAVCFPSGSLQTGEAYRSNEESSLGRDHSPSRASCSESYYVSIDDVTICIPDISQQEACTSSQFIELEQQSQEPGNSISGDCHFNLHSLPNISSMVLGQESLQLQRDCIPPSEICDIVNIPFQTSEELGVSTSMGPASMDSIKQEHMLISDDECCRVLFLNAMNNGSFSPVDFNKGEDVVEFSGCSSFLCQSCNNQISETGGSSTRQLTCPQCYNTYKGTSSSQSVHPVISVSYDRLGPTDNSNQLFGTEEHNFVSRAPDNFSYVNCISCSCVDGIGSEAMEEPHDILKGTSKLVPVNRFGCGSDAKQTCNPTEEKPNECTENENLGSLCYEPPRFPCLDMPFLSCDLVQSGSDTQQEFSPLGIRHFMMSSMNCLTPFRLWDSPSRDDSPDALLKSAAKTFTGTPSILKKRHRDLLSPLSDKRIDKRLEIDMTSTFGDNETRKADMPSSSFQKQKTSASVDDNKENCGQAYKGKQVLEPIKSATLEEKNTQKDSVDINSQHNVKQELLDSKMKINASVAAEIEKQASGVLVEHDVNDLSLSSPDQVGIKSDRGLCSKAKTPKSMKRSLEEAPNQSGNLKLSSENQCSKVNTNSPCIRAKQHEKLSVAVTRVQAPGENSAEQIRKDGGFETSSIFGGTPFGKSLESPSAWKSPWFFNTGITIEDFGYLMSPGDRSYDAIGLLREISEQTAATYANAQEILGDESPKGLLKDASENKDRDHENNDPPNQPENHSKLASNALVNMIH 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00162 975 Pfam Myb-like DNA-binding domain 45 100 - -
Pste8g00162 975 MobiDBLite consensus disorder prediction 1 20 - -
Pste8g00162 975 FunFam Transcription factor MYB3R-2 131 193 - -
Pste8g00162 975 FunFam Transcriptional activator Myb isoform A 41 94 - -
Pste8g00162 975 Gene3D - 41 93 - -
Pste8g00162 975 MobiDBLite consensus disorder prediction 670 695 - -
Pste8g00162 975 MobiDBLite consensus disorder prediction 927 975 - -
Pste8g00162 975 SUPERFAMILY Homeodomain-like 38 98 IPR009057 -
Pste8g00162 975 MobiDBLite consensus disorder prediction 194 208 - -
Pste8g00162 975 CDD SANT 45 88 IPR001005 -
Pste8g00162 975 Gene3D - 131 190 - -
Pste8g00162 975 MobiDBLite consensus disorder prediction 1 17 - -
Pste8g00162 975 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 179 IPR017930 -
Pste8g00162 975 PANTHER MYB PROTEIN-RELATED 42 100 - -
Pste8g00162 975 Pfam Myb-like DNA-binding domain 130 172 IPR001005 -
Pste8g00162 975 MobiDBLite consensus disorder prediction 668 695 - -
Pste8g00162 975 MobiDBLite consensus disorder prediction 798 816 - -
Pste8g00162 975 SUPERFAMILY Homeodomain-like 104 180 IPR009057 -
Pste8g00162 975 Gene3D - 94 129 - -
Pste8g00162 975 ProSiteProfiles Myb-like domain profile. 125 175 IPR001005 -
Pste8g00162 975 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 92 IPR017930 -
Pste8g00162 975 MobiDBLite consensus disorder prediction 194 222 - -
Pste8g00162 975 ProSiteProfiles Myb-like domain profile. 95 124 IPR001005 -
Pste8g00162 975 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 124 IPR017930 -
Pste8g00162 975 SMART sant 129 177 IPR001005 -
Pste8g00162 975 SMART sant 41 90 IPR001005 -
Pste8g00162 975 SMART sant 93 126 IPR001005 -
Pste8g00162 975 MobiDBLite consensus disorder prediction 786 816 - -
Pste8g00162 975 CDD SANT 132 172 IPR001005 -
Pste8g00162 975 ProSiteProfiles Myb-like domain profile. 37 88 IPR001005 -
Pste8g00162 975 MobiDBLite consensus disorder prediction 934 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00162 Pste-Chr8 920299 930218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00162 9 970 MYB Transcription Factor Family AT4G32730 39.198 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste8g00162 Myb_DNA-bind_6 1.1e-14 CL0123