Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00154 ATGCAGGCATCAGAACAACATAGAAGTTCAAATATGTACTATCAACCATTACAACAAATTGAAGCCTATTGCTTGCCACAGTATCGGGCCATAAATCAACAGCTGTACTATCATGATGGAGGCCGTGGAACTCACTTTCCAACTCCAGGCTCTTCTGGAATTTACTGCACATTGGAGTCATCTTCTGTTTCTGGCAGTATCACTCTTTACAACTCCCCTTCAACTGTTAGTTTCTCACCTAATGGAAGTCCCACATCCCAGCAAGATTCTCAGTCATATCCCCCTGACCAGTATCATTCCCCTGAGAATGCCTATGGCTCTCCTATGAGTGGCTCCTGCATAACTGATGACTTAAGCAGCTTCAAGCACAAGCTGAAAGAGTTGGAAAGTGTAATGCTTGGCCCTGATTCTGATAATCTTGATAGTTATGACAGTGCTATCAGTAATGGAAACAACTTTGTTTCACTTGAGATGGACAGTTGGAGACAAACAATGGTAGCAATTTCTAGCAAAAATCTAAAGCACATCCTTATTGCATGTGCCAAAGCCATTGCTGACAGTGATTTGCTAATGGCACAATGGCTGATGGATGAATTGCGACAAATTGTGTCAGTTTCTGGCGATCCAATTCAACGGTTAGGAGCATACATGTTGGAAGGACTTGTTGCACGACTGGCTGCCTCTGGGAGTTCAATATACAGATCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGACAGCGTTCACATAATTGATTTTCAAATTGGTCAAGGAAGCCAGTGGATCACTTTAATCCAGGCTTTTGCAGCTAGACCTGGAGGACCACCCCACATCCGGATTACAGGTATTGATGATTCAACATCGGCCTATGCCCGTGGTGGTGGACTACACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCACTTTAAGGTGCCATTTGAATTTCATGCTGCAGCAATCTCTGGTTGTAATGTTCAACTTCATAACCTTGGAGTTAGACCAGGGGAAGCTTTGGCTGTAAACTTTGCATTCATGCTACATCACATGCCGGATGAAAGTGTGAGTACTCAGAATCATAGGGATAGGTTGTTAAGACTGGTTAGGAGCCTATCACCAAAGGTGGTGACACTTGTTGAACAAGAATCCAACACAAACACTGCAGCATTTTTTCCACGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGAACATAAAGAGAGAATCAATGTTGAGCAGCATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGACACGAGCTGCTTGGGAAGTGGAGGTCTAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCATTGGTGAATGGTACCATCAAGAAATTGCTTGAGAACTACAGTGACAGATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTAGGAGTGGGCAACGGGATTAAGATCAACTTTGCTCAATCACTCCTTTCATGGGAGCGTACTGGAGTGGTTAATGCCGATGAGATCGTTGCTCTCGATGTGACTTGCATCATTGGTGGACCTCAACATTTGGATGGCAGTGTCTTTTTGAGAAGAGAGAAAGAACCACTTGCAAGCTGA 1764 0.4359 MQASEQHRSSNMYYQPLQQIEAYCLPQYRAINQQLYYHDGGRGTHFPTPGSSGIYCTLESSSVSGSITLYNSPSTVSFSPNGSPTSQQDSQSYPPDQYHSPENAYGSPMSGSCITDDLSSFKHKLKELESVMLGPDSDNLDSYDSAISNGNNFVSLEMDSWRQTMVAISSKNLKHILIACAKAIADSDLLMAQWLMDELRQIVSVSGDPIQRLGAYMLEGLVARLAASGSSIYRSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDSVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCNVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLEERDGALYLGVGNGIKINFAQSLLSWERTGVVNADEIVALDVTCIIGGPQHLDGSVFLRREKEPLAS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00154 587 ProSiteProfiles GRAS family profile. 164 547 IPR005202 -
Pste8g00154 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 148 548 IPR005202 -
Pste8g00154 587 MobiDBLite consensus disorder prediction 75 106 - -
Pste8g00154 587 Pfam GRAS domain family 173 530 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00154 Pste-Chr8 875334 877760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00154 12 530 GRAS Transcription Factor Family AT5G48150 65.333 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste8g00154 GRAS 7.2e-130 CL0063