Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00134 CAAACATTAATGATCAAACTCACACCCCTTTTGATTCTAGTCATGAGTGTTCATTCTCATGCTATTTTTGAGTCTTCTAATTGGAAATATGCACCAAACAAAGGAAGTGTTAGAGCTGCGTATTGGCCTTCGGGTGATGATCTTGCACCCTCTTCCATTGACACAAAATACTTCACTCATATTTACTATGCCTTCATCCAACAACATCCTCAATCTTTTAACCTCGTTATCACCGAATCCGACAAAAAATGGATACCACAATTCATCAACGGGCTCCGCTACTGTTACCCGCCTGTCAAAACTCTCTTGTCCATTGGGGGAGGTGGCAGCAACTCTACAGCATTCTCCATCATGGCTACCACCAAACACACCCGAGAAGTGTTCATAAACTCCACCATACACGTGGCACGCCGGTACGGCTTTGACGGTCTTGATTTAGATTGGGAGTTTCCCAATGATGAAATTGACATGTCTAATCTTGGTATCTTGTTTCAAGAGTGGCACCAAGCTTTGGTGTTGGAAGCAAAAATTAGTAAAAAACCGCGACTGCTTTTAACAGCCGCGGTTTATTACGCTTCCACCATCAAGCTTATAGGTAATGGACCGAGATCATATCCGGTCCAGGCCATTTGCAACTACTTGGATTGGGCTAGCCCAATGTGCTTTGACTACCATGGAACATGGGACAATTTCACAGGCTTCAATGCTGCATTGTATGATCCAAACTCCAACATAAGTACTCACTATGGAATCGGGTCTTGGATTGGTTCTGGAGTACCCGCCCAAAAGCTGGTTATGGGTTTGCCGTTATATGGGCGGGCATGGAAGCTCCAAGACCCGAATGTTAATGGGGTTGGTGCAGAAGCTGTTGGGGAAGCCACTGATACGGATGGTACTTTGGACTATGATGAAATTTTGGTGTTTAACAAAGAGAATGATGCCACTGTTGTGTATGATGATGAAGCTGTGGCTTTCTACTCTTATGCGGGTACTACTTGGATCGGGTATGATGATGGACCATCCATAACAAAGAAGGTTCAGTTTGCTAGATTTATGGGCTTAAAGGGCTATTTCTTTTGGGCTGCTGGGAAGGATAAGGATTGGACCATCTCAAGACAAGCTTCTAATGCATGGGGACACTGATGGCTTCACCAGTTCATTTTTATTCATA 1171 0.4406 MIKLTPLLILVMSVHSHAIFESSNWKYAPNKGSVRAAYWPSGDDLAPSSIDTKYFTHIYYAFIQQHPQSFNLVITESDKKWIPQFINGLRYCYPPVKTLLSIGGGGSNSTAFSIMATTKHTREVFINSTIHVARRYGFDGLDLDWEFPNDEIDMSNLGILFQEWHQALVLEAKISKKPRLLLTAAVYYASTIKLIGNGPRSYPVQAICNYLDWASPMCFDYHGTWDNFTGFNAALYDPNSNISTHYGIGSWIGSGVPAQKLVMGLPLYGRAWKLQDPNVNGVGAEAVGEATDTDGTLDYDEILVFNKENDATVVYDDEAVAFYSYAGTTWIGYDDGPSITKKVQFARFMGLKGYFFWAAGKDKDWTISRQASNAWGH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00134 377 FunFam Class V chitinase CHIT5b 267 333 - -
Pste8g00134 377 CDD GH18_plant_chitinase_class_V 34 368 - -
Pste8g00134 377 Pfam Glycosyl hydrolases family 18 37 362 IPR001223 GO:0005975
Pste8g00134 377 Gene3D - 267 333 IPR029070 -
Pste8g00134 377 SUPERFAMILY Chitinase insertion domain 268 333 IPR029070 -
Pste8g00134 377 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 138 146 IPR001579 GO:0004553|GO:0005975
Pste8g00134 377 PANTHER CHITINASE 36 375 - -
Pste8g00134 377 SUPERFAMILY (Trans)glycosidases 36 364 IPR017853 -
Pste8g00134 377 Gene3D Glycosidases 48 363 - -
Pste8g00134 377 SMART 2g34 33 362 IPR011583 GO:0008061
Pste8g00134 377 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 33 377 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00134 Pste-Chr8 771699 773891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00134 5 375 Glycoside Hydrolase AT4G19810 41.287 1.69e-94 285