Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00132 ATGGAAGGACTAAGCAAGAAGGAGGCACACTTTTGTGACAGATCAAGCATCCTCTCTTCTTCTCATACACCAGAGGCACCCCCAAGTCCAAGTACCCCACTTCAGCATCCACATGAAAAGAAACAGCTTTCTGTGGAGGAAGAAGAGGAAGAAAAGGAGGCAAAGAATGTTACCTTATTGGATCTGAATCTCTCAGGTGACGATTCATGCAGTCCAGAAGGACCAGAACTGAACCTCATCACTTGTTTGGATGTAGGGTCATCATCATCCAATAATGCAAATTCTTCATCAGAAACCCCTCTTGGTTCTGATGCTGAGCCAAGAGTTTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGTTCACAAGCACTAGGGGGCCACCAAAATGCACACAAGAGGGAGAGGTCAATAGCCAAGAGAGGGCACAGGTTTGGATCGCAGATAATGGCCTTTGGTCTTCCCTTGTTGCAAAGTAACAACAGCTATGCAAGCATGGCTTCTCTACCCCTTTATGGTGCTTGCAACAATAGAGGTGGAGCTCTTGGAATTCAGGCTCACTCCATGATCCAGAAACCCTCTCATCATCATTTGAATGGATTTGGAGGCTCTTATGCACACCATCATGGTTGGTCAAGACCCATCATTGATCAACAACCTGGAATTGCAAAGCTAGCTGTGCCTGATTCTCACAGAACAAAATCAGCATTATCATCATCACAAAGCAGTGTTGGCAGGTTTGAAATGGTTAACACCATGTTGAATTCTGCATCCAATAAAGAAATCAGTGGATGTGTGACTAGTGGTGGAACTCGTTTGAAGACTAAGCAAGAAGAAATGAAACACCTTGATTTATCCCTCAAGCTCTGA 870 0.4448 MEGLSKKEAHFCDRSSILSSSHTPEAPPSPSTPLQHPHEKKQLSVEEEEEEKEAKNVTLLDLNLSGDDSCSPEGPELNLITCLDVGSSSSNNANSSSETPLGSDAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLQSNNSYASMASLPLYGACNNRGGALGIQAHSMIQKPSHHHLNGFGGSYAHHHGWSRPIIDQQPGIAKLAVPDSHRTKSALSSSQSSVGRFEMVNTMLNSASNKEISGCVTSGGTRLKTKQEEMKHLDLSLKL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00132 289 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 289 IPR044246 GO:0009788
Pste8g00132 289 MobiDBLite consensus disorder prediction 39 55 - -
Pste8g00132 289 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Pste8g00132 289 Gene3D Classic Zinc Finger 87 151 - -
Pste8g00132 289 SUPERFAMILY beta-beta-alpha zinc fingers 107 137 IPR036236 -
Pste8g00132 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
Pste8g00132 289 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00132 Pste-Chr8 757517 758386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00132 13 289 C2H2 Transcription Factor Family AT5G10970 40.210 3.51e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste8g00132 None None None