Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00112 ATGGCAAGACCACAACAACGTTACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCAGAAATTCGCCACCCCATATTAGCCTATGATGAAGCAGCTAGGCTAATGTGTGGTGCAAGAGCAAGGACAAACTTCCCTTTCAACCCTAATGTGTCTCACTCATCATCATCTTCAAGTTCAAAGCTTCTCTCAGCAACTTTGACTGCCAAACTTCACAGGTGCTATGTGGCTTCTTTGCAAATGACAAGACAGGCTTTGGCATCATCTGAGTCTCAAAGAACACCTTCAGTGCCAAATGCAACATCCACCACCACACCAAGCAATTTCAGTGTGAAGAGTGGCATAACTGATATGGTTTTGCCACACAAAAGACCAGAGGAGGAGCAAGAGTCTGGTGTTAAAGGGGTTAAAGATGTGGAAAATGTTCCTCTACAATTCAAGCCTCTTGAGGAAGATCACATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGGTCTATTGAACTCTGCTCTGTCATTCCACCCCAGGCCCTTTGA 540 0.4556 MARPQQRYRGVRQRHWGSWVSEIRHPILAYDEAARLMCGARARTNFPFNPNVSHSSSSSSSKLLSATLTAKLHRCYVASLQMTRQALASSESQRTPSVPNATSTTTPSNFSVKSGITDMVLPHKRPEEEQESGVKGVKDVENVPLQFKPLEEDHIEQMIEELLDYGSIELCSVIPPQAL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00112 179 SMART rav1_2 7 53 IPR001471 GO:0003700|GO:0006355
Pste8g00112 179 SUPERFAMILY DNA-binding domain 7 48 IPR016177 GO:0003677
Pste8g00112 179 ProSiteProfiles AP2/ERF domain profile. 7 40 IPR001471 GO:0003700|GO:0006355
Pste8g00112 179 MobiDBLite consensus disorder prediction 88 113 - -
Pste8g00112 179 CDD AP2 6 47 IPR001471 GO:0003700|GO:0006355
Pste8g00112 179 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00112 Pste-Chr8 645583 646497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00112 1 179 AP2-EREBP Transcription Factor Family AT5G25190 54.082 4.97e-61 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00112 8 645583 646497 Pste2g01634 2 17117995 17118992 PCT