Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00100 AGAATGCTCAAATTAAAAGGTTCAGAAAAGATAACAAAAAGCAAACATTGTTTTTTCGAAGTTTAAAAAAGAAGGTCAAGTCTCAAAGATCCAAAACACACACCACATTCACTTTCTCTCACTACTCAGTGGCTAACAAAACTCAGTGAGTGAGTGTGTGTGTGTGTTTTTTTTTGTGTTGTGTTGCTTTTCAGGCACAACCCTTTTCTTCACACATCTATTATATCTTTATCTTCATGTTTTCTTAGATAGAAACAATGAAAACGAAGCTTCTTCTTATGCTTCTCATGCTCTTGCTTATTCTCCACAAACCCATTTTCATTCTTTCTTCTGCATACCCTTTTGCTCCCTCTCCTCAAGTTCCTCCCTTTTCTCCATTTCCCACTTCAATGTCTGCTTCCTCTCCAGGAATTGTAATGGGGGCTGAGCAGCAACACATGGATTCACACAAGAAAATGGTAATTGCTATTGCCGTAGCCAGCACTTCTCTTGGTGCAGTCATTTTGTGTGTGTTGTGCATCTGGATTTACCATGCCAAGTACCCTTCAAAATCCAAAGGGAAAAAAGTTCAAAGATCAGCCCAAGATGCTGAGAAAGGGCTAGCTTCATCACCATTTTTGAGTAAATTCAGCTCTATAAAGTTGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGACTATAAGCAAATAGAAAAAGTCACCGGCAATTTCAAGGAAATTAACATCTTGGGTGAGGGTGGTTTTGGATGCGTTTACAAGGCACATTTGGATGATAAATTGGAAGTTGCCGTTAAGAAATTACACTGCGAAAATCAGTATGCTGAGCAAGAATTTGAGAACGAGGTGGATTTGTTGAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGCTGTAGCAGCAATGAGGATACTAGGATTATAGTCTATGAATTGATGCATAATGGATCATTGGAAACTCAATTACATGGTAAATTGACTGATAAAAGTGATGTATATGCTTTTGGAGTTGTGCTTCTGGAGCTTCTATTGGGAAAGAAGCCTGTTGAAAAACTAGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCTAAGCTTCCAAACATTGTGGATCCTGTAATTAAGAATACAATGGACCCCAAACACTTATACCAGGTTGCTGCTGTGGCTGTGCTATGTGTGCAACCAGAACCAAGTTACCGTCCACTGATAGCAGATGTTCTTCATTCACTCATCCCTCTTGTGCCTGTAGAGCTTGGAGGAACACTCAAAGTTGCACAATTGGCACAACAGGCCTTACCTGCTGTCCCACCTGAGAATTCTAGTCAATGATCAGTTTGAGACAACATCACGTAGTGATAATCCATCAGTAACATTTTGTGATGAGATCCAACTAGTGAGGCTTTCTCAAGGCTTGAAATTAGAGAAAGATCCATAGCAACTACAATGATTCTGTAATAAATGCACGCAACCCAGGAGTGTGACTTCAGAAACAGACAAGTTGAGGAAAGAGTAGGCCTAAATGGTGTAAAAGAGCATTGGGTTGTTAATGATAAATGGGAGGAAATTGGTTTCACTCTAGTGAAAATATGTGTAGAGTGGTGATGATATTGCGGAACATTGAAACTGTTCAGAGAGGATGTCATTGTTTTTCGTTCCCTTTTTTGGCGTATGAAATTCAGCAAACCAAGACTAAAAATTCGTACATAATTTTAGAGTCTTAATAGCAAATGTGTTTTGAATCCACCCTCCATCTGTGATTGGATTTTATTTGAATTCACGAAATAATGTGACTTTCAGTCTTTC 1829 0.3909 MKTKLLLMLLMLLLILHKPIFILSSAYPFAPSPQVPPFSPFPTSMSASSPGIVMGAEQQHMDSHKKMVIAIAVASTSLGAVILCVLCIWIYHAKYPSKSKGKKVQRSAQDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKVTGNFKEINILGEGGFGCVYKAHLDDKLEVAVKKLHCENQYAEQEFENEVDLLSKIQHPNVISLLGCSSNEDTRIIVYELMHNGSLETQLHGKLTDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVAQLAQQALPAVPPENSSQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00100 365 Pfam Protein tyrosine and serine/threonine kinase 154 238 IPR001245 GO:0004672|GO:0006468
Pste8g00100 365 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Pste8g00100 365 FunFam Protein kinase superfamily protein 118 226 - -
Pste8g00100 365 Gene3D Transferase(Phosphotransferase) domain 1 223 338 - -
Pste8g00100 365 PANTHER OS01G0750732 PROTEIN 54 236 - -
Pste8g00100 365 ProSiteProfiles Protein kinase domain profile. 151 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00100 365 SUPERFAMILY Protein kinase-like (PK-like) 137 331 IPR011009 -
Pste8g00100 365 Gene3D Phosphorylase Kinase; domain 1 110 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00100 Pste-Chr8 572815 578308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00100 225 279 Receptor kinase-like Gene Family AT1G80640 60.000 4.90e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pste8g00100 PK_Tyr_Ser-Thr 2e-17 CL0016