Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00082 CTACAACTTAAAACAAAATGGCAGAAAGTGACAGAGATGCCCTTAAGTGGGGTCTGGCAGCGGATTCACTGAAGGGTAGCCACTTTGAGGAAGTAAAACGCATGGTGGCGGAGTACAGAAAGGGGGTGATCTGTGTGGGTGGCCGGGATACACTAACTATATCGGAGGTGGCTGCTGTTGCCAACCATGCTAAGGTTGACCTCTCTGAGTCTTCCAGGCCAGCCGTTGACGCCAGCTTCCACTGGATTATGGAAAACATTAACAATGGCACTCCCATTTATGGTGTCACCACCGGCTTTGGTTCTGCCTCCCACAGGCAAACTCAACAATCTCTTTCTCTTCAAAAGGAAATGGTCAGGTTTTTAAACTGCGCAATATTTGGCTACGAAACAGAGTTATCTCATACACTGCCTAAATCAGCAACCAGAGCAGCCATGCTTGTGAGGGTTAATACACTTCTTCAAGGGTACTCAGGAATAAGATTTGAAATCTTAGAAGCTATCACCAAACTCCTCAACAACAATGTCACTCCCAACCTGCCATTACGTGGTACAGTTACTGCATCTGGTGATCTGATTCCTCTGTCCTACGTAGTTGCATTGCTAACTGGTAGGCGAAACAGTAAAGCTGTTGGACCCTCTGGAGAGTCCCTCAATGCTAAGGAAGCTTTCCATTTAGCTGGCCTACATTCTGGGTTCTTTGAGTTGAAGCCCAAGGAAGGTGTTGCCCTTGTAAATGGCACAGCTGTTGGGTCTGGCGTAGCTTCTATTGTGCTTTTTGAGGCAAACATATTAGCTTTATTGGCAGAAGTTCTATCAGCAGTTTTCGCTGAAGTCATGCAGGGGAAGCCAGAATTTACACATCATCTTATACATAAGCTGAAATATCATCCTGGTCAAATTGAAGCTGCCGCTATTATGGAACACATTCTTGATGGAAGCTCTTATATAAAAAATGCTAAACTGCAACAGCCAGATCCGCTGCAGAAGCCTAGAAAAGACCGTTATGCTCTTGTAACCTCTCCTCAGTGGCTTGGTCCACAGATTGAAATCATCCGGTATGCGACCAAATCAATTGAAAGGGAAATAAACTCAGTAAATGACAATCCCTTGATTGACGTCACAAGGAATAAGGTTCTGAATGGTGGTAACTTCCAAGGAACCCCAATCGGAGTTTCAATGGATAATGCACGTTTAGCCGTGGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACTGAGCTAGTCAATGATTTATATAATAATGGGTTGCCATCAAATCTTTCTGCTGGTAGAAACCCAAGTCTGGATTATGGTTTTAAGGCATCTGAAGTCGCTATGGCTGCTTACTGTTCTGAACTTCAATATCTAGCAAATCCAGTTACAAGCCATGTGCATAGTGCTGAGCAGCACAACCAAGATGTCAACTCTTTGGGCTTAATTTCTGCTTTGAAAACTGTCGAAGCAGTTGAGATATTAAAGCTCATGTCTTCCACTTATCTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTCAAGAACACGGTCAAGAATACTGTGAGCAGAGTTGTACAAAAAACATTAATTACAGAAGACAAAGAAGAAATTAACCCATTTCGACTTTGTGAAAGAGATTTGCTTAAAGTGGTCAATAGAGAATATGTATTTTCCTACATTGATGATCCCTCTAATGTTTCATACCCATTGATGCCAAAACTAAAGCAAGTACTTTATGAACAATCACACATCAGTGCCATTAACGACAAGAATGTGAGCTTGCTGATTTTTGAGAAGATTGGAGCTTTTGAGGAGGAATTGAAGTTTCTGTTGCCAAAGGAGGTTGAAAGTGCAAGGGTGGCTTATGAAAATGGCAATCCAGCAATTCCAAACAGAATTAAGGAGTGTAGGTCATATCCACTGTACAAGTTTGTGAGGGAGGAGTTGAAGTCAGGGTTGCTCACCGGAGAAAAGACTCTCTCACCAGATGAAGAATTTGAAAAGGTATATACAGCCTTGTGTCAAGCAAAGATTATTGACCCAATTCTGGAATGCCTCGATGATTGGAACGGGGTTCCCATCCCAATATAATACGTAATGTGCAAATTTTCGACAAATAAACTAGCTGGCAACTTTTTTTGTGACGCTTGCTTTAGGATTTTATTTAAATAACTAGTTGAGACAAACTATTCTGGATTTGGCGTGTATGCCTTGTCTATACACGACTAAAACCAATCAAAAACAAATGTCACTCCTTTAATTGTCAAGTAATTGTGTCTTACACATATATGTAATTATTAAATATTAAATAATTTTGCTTATGTTACCAATCAATTTA 2349 0.4121 MAESDRDALKWGLAADSLKGSHFEEVKRMVAEYRKGVICVGGRDTLTISEVAAVANHAKVDLSESSRPAVDASFHWIMENINNGTPIYGVTTGFGSASHRQTQQSLSLQKEMVRFLNCAIFGYETELSHTLPKSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNNNVTPNLPLRGTVTASGDLIPLSYVVALLTGRRNSKAVGPSGESLNAKEAFHLAGLHSGFFELKPKEGVALVNGTAVGSGVASIVLFEANILALLAEVLSAVFAEVMQGKPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYIKNAKLQQPDPLQKPRKDRYALVTSPQWLGPQIEIIRYATKSIEREINSVNDNPLIDVTRNKVLNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVHSAEQHNQDVNSLGLISALKTVEAVEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKNTVSRVVQKTLITEDKEEINPFRLCERDLLKVVNREYVFSYIDDPSNVSYPLMPKLKQVLYEQSHISAINDKNVSLLIFEKIGAFEEELKFLLPKEVESARVAYENGNPAIPNRIKECRSYPLYKFVREELKSGLLTGEKTLSPDEEFEKVYTALCQAKIIDPILECLDDWNGVPIPI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00082 694 NCBIfam phenylalanine ammonia-lyase 8 685 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pste8g00082 694 FunFam Phenylalanine ammonia-lyase 1 242 - -
Pste8g00082 694 Gene3D - 1 242 IPR024083 -
Pste8g00082 694 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 178 194 IPR022313 GO:0016841
Pste8g00082 694 Gene3D - 508 629 IPR023144 -
Pste8g00082 694 CDD PAL-HAL 45 505 IPR001106 -
Pste8g00082 694 PANTHER HISTIDINE AMMONIA-LYASE 4 694 IPR001106 -
Pste8g00082 694 SUPERFAMILY L-aspartase-like 7 694 IPR008948 GO:0003824
Pste8g00082 694 Gene3D Fumarase/aspartase (Central domain) 243 689 - -
Pste8g00082 694 Pfam Aromatic amino acid lyase 46 508 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00082 Pste-Chr8 506470 509042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00082 7 694 Monolignol Biosynthesis Gene Families AT2G37040 71.821 0.0 1057