Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00080 ATGGCTGCACAAGCTCTGGTTTCATCTTCTTCTCTCTCCTTCTCAGCCGAGGCTGCACGACAAAGTCTTGGACCAAGATCTCTTCAATCTCCCATTCCCTTCTCCCGAAGAGCCTCCTTTTTTGTTAAGGCTGCTTCTACTCCTCCTGTCAAGCAAGGAGCTGACAGACCTTTGTGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGACGGCAGCCTTCCCGGTGACTATGGGTTTGACCCTCTGGGACTCTCAGACCCTGAAGGAACAGGAGGGTTCATTGAGCCCAAATGGCTAGCATATGGTGAGATAATCAACGGTCGTTATGCAATGTTGGGTGCAGTTGGTGCCATAGCACCTGAAATTCTTGGCAAGGCGGGTCTGATACCTCAGGAAACAGCACTCCCATGGTTCAAAACCGGTGTTTTCCCACCTGCTGGAACATACAACTACTGGGCAGATTCCTACACACTCTTCGTGTTTGAGATGGCACTCATGGGATTTGCAGAACACAGAAGATTCCAAGATTGGGCCAAACCAGGCTCCATGGGCAAACAATACTTCTTAGGACTCGAGAAAGGTCTTGGAGGTTCCGGGGAGCCAGCATACCCTGGAGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAATCCTTGAAGGATTTGAAGCTTAAGGAGGTCAAGAATGGAAGGTTGGCTATGTTGGCTATCTTGGGTTACTTTGTTCAAGCTCTTGTCACTGGAGTTGGTCCATACCAAAACCTCCTGGATCATCTCGCTGACCCCGTGCACAACAACATCTTGACCAGTCTCAAGTTCCACTAA 831 0.4874 MAAQALVSSSSLSFSAEAARQSLGPRSLQSPIPFSRRASFFVKAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFKTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNILTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00080 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 271 IPR001344 GO:0009765|GO:0016020
Pste8g00080 276 Pfam Chlorophyll A-B binding protein 67 246 IPR022796 -
Pste8g00080 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Pste8g00080 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Pste8g00080 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00080 Pste-Chr8 494829 495812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00080 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 84.058 1.84e-163 452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00080 8 494829 495812 Pste8g00080 8 494829 495812 ECH